RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	PGLS	O95336	258 aa		13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	CP	P00450	1065 aa		13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	HLA-DQB2	P05538	268 aa		13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	ELFN1	P0C7U0	828 aa		13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	THOP1	P52888	689 aa		13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	HNRNPK	P61978	463 aa	Known RBP eCLIP	13.36	□□□□□ -0.27	2e-9	■□□□□ 10
SREBF1-223	ENST00000584760	PPID	Q08752	370 aa	Known RBP	13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	IHH	Q14623	411 aa		13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	SPA17	Q15506	151 aa		13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	TAZ	Q16635	292 aa		13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	PROX2	Q3B8N5	592 aa		13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	MACC1	Q6ZN28	852 aa		13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	PAF1	Q8N7H5	531 aa		13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	OR4C6	Q8NH72	309 aa		13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	OLFM3	Q96PB7	478 aa		13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	DDX56	Q9NY93	547 aa	Known RBP	13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	B4GALT6	Q9UBX8	382 aa		13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	AMACR	Q9UHK6	382 aa		13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	REXO2	Q9Y3B8	237 aa	Known RBP	13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.36	□□□□□ -0.27
SREBF1-223	ENST00000584760	BPTF	Q12830	3046 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	SCN8A	Q9UQD0	1980 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	RCCD1	A6NED2	376 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	APOL1	O14791	398 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	FFAR2	O15552	330 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	SIGLEC6	O43699	453 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	LZTS3	O60299	673 aa	Predicted RBP	13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	FZD6	O60353	706 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	RECQL5	O94762	991 aa	Predicted RBP	13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	C1S	P09871	688 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	CCNB1	P14635	433 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	LHCGR	P22888	699 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	CDKN2B	P42772	138 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	NOP2	P46087	812 aa	Known RBP	13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	DSC2	Q02487	901 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	ZNF211	Q13398	564 aa	Predicted RBP	13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	PTK2B	Q14289	1009 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	CNGA3	Q16281	694 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	ARMC12	Q5T9G4	340 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	HES3	Q5TGS1	186 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	C11orf63	Q6NUN7	778 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	MFSD7	Q6UXD7	560 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	RAD9B	Q6WBX8	426 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	TMTC1	Q8IUR5	882 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	CCDC13	Q8IYE1	715 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	ZNF843	Q8N446	348 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	ARRDC2	Q8TBH0	407 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	RNF25	Q96BH1	459 aa	Predicted RBP	13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	ZNF830	Q96NB3	372 aa	Predicted RBP	13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	LGMN	Q99538	433 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	ANP32E	Q9BTT0	268 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	LUC7L	Q9NQ29	371 aa	Known RBP	13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.35	□□□□□ -0.27	2e-10	■■■■□ 24.1
SREBF1-223	ENST00000584760	NLGN3	Q9NZ94	848 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	SALL4	Q9UJQ4	1053 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	PHTF1	Q9UMS5	762 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	HEY1	Q9Y5J3	304 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	ALG6	Q9Y672	507 aa		13.35	□□□□□ -0.27
SREBF1-223	ENST00000584760	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760		A8MX80	341 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760		H3BM21	787 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	KCNK1	O00180	336 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	HEXIM1	O94992	359 aa	Known RBP	13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	PCCB	P05166	539 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	PDHA1	P08559	390 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	CDK4	P11802	303 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	TNNT1	P13805	278 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	JUND	P17535	347 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	CKMT2	P17540	419 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	CDC25B	P30305	580 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	VIPR1	P32241	457 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	MARCKSL1	P49006	195 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	PEX5	P50542	639 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	IFI35	P80217	286 aa	Predicted RBP	13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	NIPAL4	Q0D2K0	466 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	ZBTB17	Q13105	803 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	MTM1	Q13496	603 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	INPP5A	Q14642	412 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	NFATC4	Q14934	902 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	RTP5	Q14D33	572 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	NPNT	Q6UXI9	565 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	GPR155	Q7Z3F1	870 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	TMEM139	Q8IV31	216 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	PHACTR4	Q8IZ21	702 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	RBFA	Q8N0V3	343 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	PLA2G15	Q8NCC3	412 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	LSM14A	Q8ND56	463 aa	Known RBP	13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	TPCN2	Q8NHX9	752 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	PIH1D2	Q8WWB5	315 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	TBATA	Q96M53	351 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	COQ10A	Q96MF6	247 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	IL12RB2	Q99665	862 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	TDRD1	Q9BXT4	1180 aa	Known RBP	13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	NRSN2	Q9GZP1	204 aa		13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.34	□□□□□ -0.27
SREBF1-223	ENST00000584760	HAUS2	Q9NVX0	235 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms