RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 GTPBP1O00178 669 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 ASAP2O43150 1006 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 NDUFB4O95168 129 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 IPO7O95373 1038 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 TOMM40O96008 361 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 NUDT6P53370 316 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 ROR2Q01974 943 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 ST3GAL1Q11201 340 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 NEDD9Q14511 834 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 TYW3Q6IPR3 259 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 KLHL35Q6PF15 583 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 CLEC4GQ6UXB4 293 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 LINGO2Q7L985 606 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 SHFQ7M4L6 423 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 ARHGAP12Q8IWW6 846 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 SCCPDHQ8NBX0 429 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 NEK9Q8TD19 979 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 NAF1Q96HR8 494 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 CMTM3Q96MX0 182 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 SLITRK1Q96PX8 696 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 TREX2Q9BQ50 279 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 GHITMQ9H3K2 345 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 KAT14Q9H8E8 782 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 IL36RNQ9UBH0 155 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 FBXO2Q9UK22 296 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 RCOR1Q9UKL0 485 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 PAM16Q9Y3D7 125 aa5.72□□□□□ -1.49
SMARCE1-219ENST00000583294 KAT6BQ8WYB5 2073 aa5.71□□□□□ -1.49
SMARCE1-219ENST00000583294 A6NCN8 305 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 TMEM202A6NGA9 273 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 MYO1GB0I1T2 1018 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 VNN2O95498 520 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 CYC1P08574 325 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 G6PDP11413 515 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 ZNF182P17025 639 aaPredicted RBP5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 CHATP28329 748 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 HOXA11P31270 313 aaPredicted RBP5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 RPL3P39023 403 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 CLNS1AP54105 237 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 ABATP80404 500 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 GKAP1Q5VSY0 366 aaPredicted RBP5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 ANKRD54Q6NXT1 300 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 CFAP161Q6P656 301 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 ZNF549Q6P9A3 640 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 CCDC129Q6ZRS4 1044 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 FASTKD5Q7L8L6 764 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 PCGF5Q86SE9 256 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 PRR26Q8N8Z3 221 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 AGBL3Q8NEM8 1001 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 SCFD2Q8WU76 684 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 POMGNT1Q8WZA1 660 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 SF3B5Q9BWJ5 86 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 DCLK3Q9C098 648 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 NDST4Q9H3R1 872 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 EBF3Q9H4W6 596 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 SLC28A3Q9HAS3 691 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 RANGRFQ9HD47 186 aaPredicted RBP5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 HIF1ANQ9NWT6 349 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 ERVK-11Q9UQG0 969 aa5.71□□□□□ -1.5
SMARCE1-219ENST00000583294 FRMD3A2A2Y4 597 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 BTBD18B2RXH4 712 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 SOX30O94993 753 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 CDC25AP30304 524 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 HOXD3P31249 432 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 EIF2S3P41091 472 aaKnown RBP5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 COMPP49747 757 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 CLCN3P51790 818 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 KRTAP10-11P60412 298 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 NIPAL4Q0D2K0 466 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 USP41Q3LFD5 358 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 B3GNT6Q6ZMB0 384 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 MTSS1LQ765P7 747 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 PELI3Q8N2H9 469 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 AADATQ8N5Z0 425 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 OR14L1PQ8NHC6 308 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 ADAMTS14Q8WXS8 1223 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 TXNDC15Q96J42 360 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 SLC41A2Q96JW4 573 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 C1orf74Q96LT6 269 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 TMEM68Q96MH6 324 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 CAMK1GQ96NX5 476 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 FAM110AQ9BQ89 295 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 TMEM47Q9BQJ4 181 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 SH2D4AQ9H788 454 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 MKKSQ9NPJ1 570 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 TBC1D29Q9UFV1 150 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 ZNF215Q9UL58 517 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 GPR34Q9UPC5 381 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 STON1Q9Y6Q2 735 aa5.7□□□□□ -1.5
SMARCE1-219ENST00000583294 RSF1Q96T23 1441 aaPredicted RBP5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 IGHV4-28A0A0C4DH34 117 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 MYMKA6NI61 221 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 AKR1B15C9JRZ8 316 aaPredicted RBP5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 VILLO15195 856 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 HSPA12AO43301 675 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 ZIC3O60481 467 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 SLC25A12O75746 678 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 BMP15O95972 392 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 IGKV2-30P06310 120 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 CD58P19256 250 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms