RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 VAT1Q99536 393 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 CLK4Q9HAZ1 481 aaKnown RBP13.69□□□□□ -0.22
GGA3-214ENST00000582717 MARCH5Q9NX47 278 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 GMIPQ9P107 970 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 FAF1Q9UNN5 650 aaPredicted RBP13.69□□□□□ -0.22
GGA3-214ENST00000582717 PCDHGA7Q9Y5G6 932 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 HS3ST4Q9Y661 456 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 TCRBV3S1A0A5B6 114 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 SOAT2O75908 522 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 SBK3P0C264 359 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 DNAJB2P25686 324 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 RAB15P59190 212 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 NRF1Q16656 503 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 KCTD21Q4G0X4 260 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 CERCAMQ5T4B2 595 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 KLHL35Q6PF15 583 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 ATPAF2Q8N5M1 289 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.69□□□□□ -0.22
GGA3-214ENST00000582717 KDM1BQ8NB78 822 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 SLAIN1Q8ND83 568 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 ABTB1Q969K4 478 aaPredicted RBP13.69□□□□□ -0.22
GGA3-214ENST00000582717 PBXIP1Q96AQ6 731 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 FAR2Q96K12 515 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 CASD1Q96PB1 797 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 TMEM79Q9BSE2 394 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 SLC39A8Q9C0K1 460 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 OLAHQ9NV23 265 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 MAGED2Q9UNF1 606 aaPredicted RBP13.69□□□□□ -0.22
GGA3-214ENST00000582717 PCDHB5Q9Y5E4 795 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 TARM1B6A8C7 271 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 E9PAM4 449 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 TRIM24O15164 1050 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 FGF10O15520 208 aaPredicted RBP13.68□□□□□ -0.22
GGA3-214ENST00000582717 ATXN3P54252 364 aaPredicted RBP13.68□□□□□ -0.22
GGA3-214ENST00000582717 ESRRGP62508 458 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 PDAP1Q13442 181 aaKnown RBP13.68□□□□□ -0.22
GGA3-214ENST00000582717 MRPL58Q14197 206 aaKnown RBP13.68□□□□□ -0.22
GGA3-214ENST00000582717 GRM3Q14832 879 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 UGP2Q16851 508 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 MSANTD2Q6P1R3 559 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 MON1AQ86VX9 555 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 ZC3HC1Q86WB0 502 aaKnown RBP13.68□□□□□ -0.22
GGA3-214ENST00000582717 FAM126BQ8IXS8 530 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 ABI1Q8IZP0 508 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 PELI3Q8N2H9 469 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 SERPINB11Q96P15 392 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 TSGA13Q96PP4 275 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 ELAC1Q9H777 363 aaKnown RBP13.68□□□□□ -0.22
GGA3-214ENST00000582717 CATSPERBQ9H7T0 1116 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 CAAP1Q9H8G2 361 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 IARS2Q9NSE4 1012 aaKnown RBP13.68□□□□□ -0.22
GGA3-214ENST00000582717 MPP6Q9NZW5 540 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 PTBP2Q9UKA9 531 aaKnown RBP13.68□□□□□ -0.22
GGA3-214ENST00000582717 PCDHB7Q9Y5E2 793 aa13.68□□□□□ -0.22
GGA3-214ENST00000582717 SH3PXD2BA1X283 911 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 TRIM64CA6NLI5 447 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 SDHDO14521 159 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 MAFKO60675 156 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 GNRH1P01148 92 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 HNRNPCP07910 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
GGA3-214ENST00000582717 F7P08709 466 aaPredicted RBP13.67□□□□□ -0.22
GGA3-214ENST00000582717 COL6A1P12109 1028 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 TCN1P20061 433 aaPredicted RBP13.67□□□□□ -0.22
GGA3-214ENST00000582717 CCNCP24863 283 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 CCR10P46092 362 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 SLC11A1P49279 550 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 ARPP19P56211 112 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 ZNF33AQ06730 810 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 SQLEQ14534 574 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 USP10Q14694 798 aaKnown RBP13.67□□□□□ -0.22
GGA3-214ENST00000582717 PIK3R6Q5UE93 754 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 LRRC8EQ6NSJ5 796 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 TRIM67Q6ZTA4 783 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 PIWIL4Q7Z3Z4 852 aaKnown RBP13.67□□□□□ -0.22
GGA3-214ENST00000582717 AFAP1L2Q8N4X5 818 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 PACRGLQ8N7B6 248 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 ANKFN1Q8N957 763 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 LRTOMTQ8WZ04 291 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 MFSD3Q96ES6 412 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 SLC39A13Q96H72 371 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 OSBPL6Q9BZF3 934 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 MRM3Q9HC36 420 aaKnown RBP13.67□□□□□ -0.22
GGA3-214ENST00000582717 FAIMQ9NVQ4 179 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 RUVBL2Q9Y230 463 aaKnown RBP13.67□□□□□ -0.22
GGA3-214ENST00000582717 SCN5AQ14524 2016 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 A0A087WXM4 84 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 A0A1B0GTW7 788 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 DLX3O60479 287 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 STAMBPO95630 424 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 TPH1P17752 444 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 HTR7P34969 479 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 PBX3P40426 434 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 MAGEA11P43364 429 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 ABCG1P45844 678 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 KPNA2P52292 529 aaKnown RBP13.67□□□□□ -0.22
GGA3-214ENST00000582717 SAMD4BQ5PRF9 694 aaKnown RBP13.67□□□□□ -0.22
GGA3-214ENST00000582717 ZNF280DQ6N043 979 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 RSPO2Q6UXX9 243 aaPredicted RBP13.67□□□□□ -0.22
GGA3-214ENST00000582717 CHSY3Q70JA7 882 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 GPR141Q7Z602 305 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms