RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 SERAC1Q96JX3 654 aa20.1■□□□□ 0.81
TOP3A-213ENST00000582230 LENG8Q96PV6 779 aaPredicted RBP20.1■□□□□ 0.81
TOP3A-213ENST00000582230 FICDQ9BVA6 458 aa20.1■□□□□ 0.81
TOP3A-213ENST00000582230 MIR1-1HGQ9H1L0 117 aa20.1■□□□□ 0.81
TOP3A-213ENST00000582230 ARRDC1-AS1Q9H2J1 176 aa20.1■□□□□ 0.81
TOP3A-213ENST00000582230 EBF2Q9HAK2 575 aa20.1■□□□□ 0.81
TOP3A-213ENST00000582230 ARNT2Q9HBZ2 717 aa20.1■□□□□ 0.81
TOP3A-213ENST00000582230 KCTD5Q9NXV2 234 aa20.1■□□□□ 0.81
TOP3A-213ENST00000582230 NCDNQ9UBB6 729 aa20.1■□□□□ 0.81
TOP3A-213ENST00000582230 WDFY4Q6ZS81 3184 aa20.1■□□□□ 0.81
TOP3A-213ENST00000582230 BCAT2O15382 392 aaPredicted RBP20.09■□□□□ 0.81
TOP3A-213ENST00000582230 SLC31A1O15431 190 aa20.09■□□□□ 0.81
TOP3A-213ENST00000582230 LZTS3O60299 673 aaPredicted RBP20.09■□□□□ 0.81
TOP3A-213ENST00000582230 PAK4O96013 591 aaPredicted RBP20.09■□□□□ 0.81
TOP3A-213ENST00000582230 HNRNPA2B1P22626 353 aaKnown RBP20.09■□□□□ 0.81
TOP3A-213ENST00000582230 MPLP40238 635 aa20.09■□□□□ 0.81
TOP3A-213ENST00000582230 RACK1P63244 317 aaKnown RBP20.09■□□□□ 0.81
TOP3A-213ENST00000582230 CKAP4Q07065 602 aaKnown RBP20.09■□□□□ 0.81
TOP3A-213ENST00000582230 CNGA3Q16281 694 aa20.09■□□□□ 0.81
TOP3A-213ENST00000582230 SYDE1Q6ZW31 735 aaPredicted RBP20.09■□□□□ 0.81
TOP3A-213ENST00000582230 LINC00523Q86TU6 105 aa20.09■□□□□ 0.81
TOP3A-213ENST00000582230 CBARPQ8N350 705 aaPredicted RBP20.09■□□□□ 0.81
TOP3A-213ENST00000582230 TAB3Q8N5C8 712 aaPredicted RBP20.09■□□□□ 0.81
TOP3A-213ENST00000582230 PDCD7Q8N8D1 485 aaKnown RBP20.09■□□□□ 0.81
TOP3A-213ENST00000582230 DENND6BQ8NEG7 585 aa20.09■□□□□ 0.81
TOP3A-213ENST00000582230 SPATA4Q8NEY3 305 aa20.09■□□□□ 0.81
TOP3A-213ENST00000582230 C1orf216Q8TAB5 229 aa20.09■□□□□ 0.81
TOP3A-213ENST00000582230 CCHCR1Q8TD31 782 aa20.09■□□□□ 0.81
TOP3A-213ENST00000582230 KLK6Q92876 244 aa20.09■□□□□ 0.81
TOP3A-213ENST00000582230 TBL1YQ9BQ87 522 aa20.09■□□□□ 0.81
TOP3A-213ENST00000582230 TMEM74BQ9NUR3 256 aa20.09■□□□□ 0.81
TOP3A-213ENST00000582230 NEU2Q9Y3R4 380 aa20.09■□□□□ 0.81
TOP3A-213ENST00000582230 MUC6Q6W4X9 2439 aa20.09■□□□□ 0.81
TOP3A-213ENST00000582230 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.08■□□□□ 0.81
TOP3A-213ENST00000582230 C1orf232A0A0U1RR37 186 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 A0A1B0GTW7 788 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 LRP3O75074 770 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 LHCGRP22888 699 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 CHRNA4P43681 627 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 LMAN1P49257 510 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 FGL2Q14314 439 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 ACOX1Q15067 660 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 PTPRRQ15256 657 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 WHAMMP3Q1A5X7 153 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 DUOXA1Q1HG43 343 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 LRRC66Q68CR7 880 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 ZNF572Q7Z3I7 529 aaPredicted RBP20.08■□□□□ 0.81
TOP3A-213ENST00000582230 TSPAN33Q86UF1 283 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 KLHL7Q8IXQ5 586 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 FAM174AQ8TBP5 190 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 RUBCNQ92622 972 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 SMIM14Q96QK8 99 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 PHOX2BQ99453 314 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 TRABDQ9H4I3 376 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 TM9SF3Q9HD45 589 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 EIF2B3Q9NR50 452 aaKnown RBP20.08■□□□□ 0.81
TOP3A-213ENST00000582230 HACD3Q9P035 362 aa20.08■□□□□ 0.81
TOP3A-213ENST00000582230 RECQL5O94762 991 aaPredicted RBP20.07■□□□□ 0.8
TOP3A-213ENST00000582230 SUN1O94901 812 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 APRTP07741 180 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 AFF3P51826 1226 aaKnown RBP20.07■□□□□ 0.8
TOP3A-213ENST00000582230 BASP1P80723 227 aaKnown RBP20.07■□□□□ 0.8
TOP3A-213ENST00000582230 CDK16Q00536 496 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 PTSQ03393 145 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 GPS1Q13098 491 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 SPARCL1Q14515 664 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 STAT4Q14765 748 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 PPP1R7Q15435 360 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 TEAD4Q15561 434 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 TRIP13Q15645 432 aaPredicted RBP20.07■□□□□ 0.8
TOP3A-213ENST00000582230 CDKN3Q16667 212 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 ZCCHC9Q8N567 271 aaKnown RBP20.07■□□□□ 0.8
TOP3A-213ENST00000582230 TMEM145Q8NBT3 493 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 SKA1Q96BD8 255 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 CENPTQ96BT3 561 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 COQ10AQ96MF6 247 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 APOL2Q9BQE5 337 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 ZFYVE1Q9HBF4 777 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 AASDHPPTQ9NRN7 309 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 COQ6Q9Y2Z9 468 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 HS3ST3A1Q9Y663 406 aa20.07■□□□□ 0.8
TOP3A-213ENST00000582230 ABCA7Q8IZY2 2146 aa20.06■□□□□ 0.8
TOP3A-213ENST00000582230 ATXN2Q99700 1313 aaKnown RBP20.06■□□□□ 0.8
TOP3A-213ENST00000582230 WNT9AO14904 365 aa20.06■□□□□ 0.8
TOP3A-213ENST00000582230 CLDN7O95471 211 aa20.06■□□□□ 0.8
TOP3A-213ENST00000582230 STC1P52823 247 aa20.06■□□□□ 0.8
TOP3A-213ENST00000582230 DR1Q01658 176 aa20.06■□□□□ 0.8
TOP3A-213ENST00000582230 OVGP1Q12889 678 aa20.06■□□□□ 0.8
TOP3A-213ENST00000582230 DHX34Q14147 1143 aaKnown RBP20.06■□□□□ 0.8
TOP3A-213ENST00000582230 LRRC14Q15048 493 aa20.06■□□□□ 0.8
TOP3A-213ENST00000582230 PLA2G2CQ5R387 149 aa20.06■□□□□ 0.8
TOP3A-213ENST00000582230 DENND2CQ68D51 928 aa20.06■□□□□ 0.8
TOP3A-213ENST00000582230 DENND5AQ6IQ26 1287 aa20.06■□□□□ 0.8
TOP3A-213ENST00000582230 HSD11B1LQ7Z5J1 315 aa20.06■□□□□ 0.8
TOP3A-213ENST00000582230 SLC6A18Q96N87 628 aa20.06■□□□□ 0.8
TOP3A-213ENST00000582230 KLF6Q99612 283 aaPredicted RBP20.06■□□□□ 0.8
TOP3A-213ENST00000582230 GPR63Q9BZJ6 419 aa20.06■□□□□ 0.8
TOP3A-213ENST00000582230 ZNF711Q9Y462 761 aa20.06■□□□□ 0.8
TOP3A-213ENST00000582230 NUMA1Q14980 2115 aa20.06■□□□□ 0.8
TOP3A-213ENST00000582230 ANKRD36A6QL64 1941 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms