RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 TM4SF20Q53R12 229 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 DNAJC21Q5F1R6 531 aaKnown RBP6.61□□□□□ -1.35
TVP23B-209ENST00000581733 HECTD3Q5T447 861 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 RNF187Q5TA31 235 aaPredicted RBP6.61□□□□□ -1.35
TVP23B-209ENST00000581733 SDHAF4Q5VUM1 108 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 RWDD4Q6NW29 188 aaKnown RBP6.61□□□□□ -1.35
TVP23B-209ENST00000581733 KLHDC10Q6PID8 442 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 CCDC149Q6ZUS6 474 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 OTOP2Q7RTS6 562 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 TAS1R1Q7RTX1 841 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 UBE2Q1Q7Z7E8 422 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 TCEAL8Q8IYN2 117 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 CNPY4Q8N129 248 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 ELMOD1Q8N336 334 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 RIBC1Q8N443 379 aaPredicted RBP6.61□□□□□ -1.35
TVP23B-209ENST00000581733 ATPAF2Q8N5M1 289 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 TTC9BQ8N6N2 239 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 ATP11CQ8NB49 1132 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 CCNYQ8ND76 341 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 TMEM52Q8NDY8 209 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 PHOSPHO2Q8TCD6 241 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 CPT1BQ92523 772 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 HDAC11Q96DB2 347 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 MFSD3Q96ES6 412 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 ATP6V1G3Q96LB4 118 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 C1orf74Q96LT6 269 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 ZNF512Q96ME7 567 aaPredicted RBP6.61□□□□□ -1.35
TVP23B-209ENST00000581733 SPATA13Q96N96 652 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 CLUHP3Q96NS8 147 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 SORCS2Q96PQ0 1159 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 VAT1Q99536 393 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 DDX50Q9BQ39 737 aaKnown RBP6.61□□□□□ -1.35
TVP23B-209ENST00000581733 CLSTN3Q9BQT9 956 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 TMEM109Q9BVC6 243 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 VN1R3Q9BXE9 311 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 NACA2Q9H009 215 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 SIK2Q9H0K1 926 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 RETREG1Q9H6L5 497 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 NMUR1Q9HB89 426 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 CYP4F11Q9HBI6 524 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 TRIM39Q9HCM9 518 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 XAB2Q9HCS7 855 aaKnown RBP6.61□□□□□ -1.35
TVP23B-209ENST00000581733 SAYSD1Q9NPB0 183 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 EIF2B3Q9NR50 452 aaKnown RBP6.61□□□□□ -1.35
TVP23B-209ENST00000581733 ETNK2Q9NVF9 386 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 HAUS2Q9NVX0 235 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 SMPD4Q9NXE4 827 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 VPS18Q9P253 973 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 TNFRSF10DQ9UBN6 386 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 SFMBT1Q9UHJ3 866 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 XPO7Q9UIA9 1087 aaKnown RBP6.61□□□□□ -1.35
TVP23B-209ENST00000581733 TRHDEQ9UKU6 1024 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 MAGED2Q9UNF1 606 aaPredicted RBP6.61□□□□□ -1.35
TVP23B-209ENST00000581733 LZTS1Q9Y250 596 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 YIPF1Q9Y548 306 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 ASB3Q9Y575 518 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 SLC4A7Q9Y6M7 1214 aa6.61□□□□□ -1.35
TVP23B-209ENST00000581733 SLC12A8A0AV02 714 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 ERI2A8K979 691 aaKnown RBP6.6□□□□□ -1.35
TVP23B-209ENST00000581733 E9PAM4 449 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 H0YGN5 161 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 AGPSO00116 658 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 AP3B1O00203 1094 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 RNF103O00237 685 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 AQP7O14520 342 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 RASGRF2O14827 1237 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 POLR3GO15318 223 aaPredicted RBP6.6□□□□□ -1.35
TVP23B-209ENST00000581733 PSMD3O43242 534 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 MSI1O43347 362 aaKnown RBP6.6□□□□□ -1.35
TVP23B-209ENST00000581733 SOAT2O75908 522 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 NEBLO76041 1014 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 FGF18O76093 207 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 VNN2O95498 520 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 ACSL3O95573 720 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 SYF2O95926 243 aaKnown RBP6.6□□□□□ -1.35
TVP23B-209ENST00000581733 LRG1P02750 347 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 ZSCAN5DPP0CG00 497 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 CTSAP10619 480 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 NAT1P18440 290 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 RPL17P18621 184 aaKnown RBP6.6□□□□□ -1.35
TVP23B-209ENST00000581733 ATF6P18850 670 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 ITGB8P26012 769 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 CHKAP35790 457 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 ATP5C1P36542 298 aaKnown RBP6.6□□□□□ -1.35
TVP23B-209ENST00000581733 MAGEA6P43360 314 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 MASP1P48740 699 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 SLC11A2P49281 568 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 HARS2P49590 506 aaKnown RBP6.6□□□□□ -1.35
TVP23B-209ENST00000581733 UBE3AQ05086 875 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 ZNF844Q08AG5 666 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 GALNT2Q10471 571 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 PDIA2Q13087 525 aaKnown RBP6.6□□□□□ -1.35
TVP23B-209ENST00000581733 EIF4EBP2Q13542 120 aaPredicted RBP6.6□□□□□ -1.35
TVP23B-209ENST00000581733 SEMA5AQ13591 1074 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 SLC29A2Q14542 456 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 PRPSAP1Q14558 356 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 KCNJ11Q14654 390 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 ANO4Q32M45 955 aa6.6□□□□□ -1.35
TVP23B-209ENST00000581733 PABPC1LQ4VXU2 614 aaKnown RBP6.6□□□□□ -1.35
TVP23B-209ENST00000581733 CCDC38Q502W7 563 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms