RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 NFKBIL1Q9UBC1 381 aaPredicted RBP10.44□□□□□ -0.74
CCDC47-203ENST00000580986 SERGEFQ9UGK8 458 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 RIMKLBQ9ULI2 386 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 PCDHGA2Q9Y5H1 932 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 ZNF106Q9H2Y7 1883 aaKnown RBP10.43□□□□□ -0.74
CCDC47-203ENST00000580986 RGSL1A5PLK6 1076 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 LRRC72A6NJI9 287 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 LATO43561 262 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 TMEM63AO94886 807 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 HEXIM1O94992 359 aaKnown RBP10.43□□□□□ -0.74
CCDC47-203ENST00000580986 AGTP01019 485 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 PSMA3P25788 255 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 HMGCLP35914 325 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 NPY2RP49146 381 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 CCR5P51681 352 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 RALGDSQ12967 914 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 CAMK2BQ13554 666 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 CUL1Q13616 776 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 ANGPT1Q15389 498 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 CDKN3Q16667 212 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 ZDHHC20Q5W0Z9 365 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.43□□□□□ -0.74
CCDC47-203ENST00000580986 ZNF534Q76KX8 674 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 CYP2U1Q7Z449 544 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.43□□□□□ -0.74
CCDC47-203ENST00000580986 DTX3LQ8TDB6 740 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.43□□□□□ -0.74
CCDC47-203ENST00000580986 LRRC39Q96DD0 335 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 TSPYL1Q9H0U9 437 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 MRM3Q9HC36 420 aaKnown RBP10.43□□□□□ -0.74
CCDC47-203ENST00000580986 FAM114A2Q9NRY5 505 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 ZSCAN32Q9NX65 697 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 GRHL1Q9NZI5 618 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.43□□□□□ -0.74
CCDC47-203ENST00000580986 FANCMQ8IYD8 2048 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 SCN8AQ9UQD0 1980 aa10.43□□□□□ -0.74
CCDC47-203ENST00000580986 TCRBV7S3A2A0A539 114 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 FAM86C2PA6NEL3 165 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 NPIPB15A6NHN6 443 aaPredicted RBP10.42□□□□□ -0.74
CCDC47-203ENST00000580986 E7ESA3 106 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 EIF3HO15372 352 aaKnown RBP eCLIP10.42□□□□□ -0.74
CCDC47-203ENST00000580986 LILRB5O75023 590 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 CRTAMO95727 393 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 SEMA4FO95754 770 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 TNFRSF8P28908 595 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 HNF1BP35680 557 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 CHRNA4P43681 627 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 ITGA8P53708 1063 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 DCDC1P59894 354 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 RPS21P63220 83 aaKnown RBP10.42□□□□□ -0.74
CCDC47-203ENST00000580986 CSTF1Q05048 431 aaKnown RBP10.42□□□□□ -0.74
CCDC47-203ENST00000580986 GALNT3Q14435 633 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 TAF1AQ15573 450 aaPredicted RBP10.42□□□□□ -0.74
CCDC47-203ENST00000580986 POM121L1PQ3SYA9 428 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 TMEM259Q4ZIN3 620 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 ANKRD22Q5VYY1 191 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 LIPIQ6XZB0 460 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 CEP128Q6ZU80 1094 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 ZNF765Q7L2R6 523 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 NLRP9Q7RTR0 991 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 TMC3Q7Z5M5 1100 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 CAND1Q86VP6 1230 aaKnown RBP10.42□□□□□ -0.74
CCDC47-203ENST00000580986 NLRP8Q86W28 1048 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 HORMAD1Q86X24 394 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 PAF1Q8N7H5 531 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 DNAAF3Q8N9W5 541 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 DENND6BQ8NEG7 585 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 OR14C36Q8NHC7 312 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 GAB3Q8WWW8 586 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 ART4Q93070 314 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 SERPINB12Q96P63 405 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 NAT9Q9BTE0 207 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 LRFN3Q9BTN0 628 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 TPSD1Q9BZJ3 242 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 DUSP15Q9H1R2 295 aaPredicted RBP10.42□□□□□ -0.74
CCDC47-203ENST00000580986 ZFYVE1Q9HBF4 777 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 GDF3Q9NR23 364 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 RAD18Q9NS91 495 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 BFARQ9NZS9 450 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 B4GALT6Q9UBX8 382 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 DMGDHQ9UI17 866 aaKnown RBP10.42□□□□□ -0.74
CCDC47-203ENST00000580986 TSR3Q9UJK0 312 aaKnown RBP10.42□□□□□ -0.74
CCDC47-203ENST00000580986 ZNF711Q9Y462 761 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 CUL9Q8IWT3 2517 aa10.42□□□□□ -0.74
CCDC47-203ENST00000580986 MAGEB16A2A368 324 aa10.41□□□□□ -0.74
CCDC47-203ENST00000580986 HEATR9A2RTY3 570 aa10.41□□□□□ -0.74
CCDC47-203ENST00000580986 MROH6A6NGR9 719 aa10.41□□□□□ -0.74
CCDC47-203ENST00000580986 F5H423 210 aaPredicted RBP10.41□□□□□ -0.74
CCDC47-203ENST00000580986 H7C0S8 307 aa10.41□□□□□ -0.74
CCDC47-203ENST00000580986 RNGTTO60942 597 aaKnown RBP10.41□□□□□ -0.74
CCDC47-203ENST00000580986 USP12O75317 370 aa10.41□□□□□ -0.74
CCDC47-203ENST00000580986 TUBBP07437 444 aa10.41□□□□□ -0.74
CCDC47-203ENST00000580986 ELFN1P0C7U0 828 aa10.41□□□□□ -0.74
CCDC47-203ENST00000580986 SP9P0CG40 484 aa10.41□□□□□ -0.74
CCDC47-203ENST00000580986 LHCGRP22888 699 aa10.41□□□□□ -0.74
CCDC47-203ENST00000580986 ADRA1DP25100 572 aa10.41□□□□□ -0.74
CCDC47-203ENST00000580986 ACSL1P33121 698 aa10.41□□□□□ -0.74
CCDC47-203ENST00000580986 STC1P52823 247 aa10.41□□□□□ -0.74
CCDC47-203ENST00000580986 GUCY2DQ02846 1103 aa10.41□□□□□ -0.74
CCDC47-203ENST00000580986 ACVR1Q04771 509 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms