RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 FSBPO95073 299 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 ZSCAN5DPP0CG00 497 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 CYP2A6P11509 494 aaPredicted RBP15.58■□□□□ 0.08
SS18-216ENST00000580751 TPSB2P20231 275 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 NUDT1P36639 197 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 MMP12P39900 470 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 PTGER3P43115 390 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 WNT3AP56704 352 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 RPS21P63220 83 aaKnown RBP15.58■□□□□ 0.08
SS18-216ENST00000580751 FAM193AP78312 1265 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 MRPS25P82663 173 aaKnown RBP15.58■□□□□ 0.08
SS18-216ENST00000580751 CDK18Q07002 472 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 NAA30Q147X3 362 aaPredicted RBP15.58■□□□□ 0.08
SS18-216ENST00000580751 TPSAB1Q15661 275 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 PCSK7Q16549 785 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 RNASEH2BQ5TBB1 312 aaKnown RBP15.58■□□□□ 0.08
SS18-216ENST00000580751 HIBCHQ6NVY1 386 aaPredicted RBP15.58■□□□□ 0.08
SS18-216ENST00000580751 DPPA4Q7L190 304 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 ARMCX6Q7L4S7 300 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 HORMAD1Q86X24 394 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 SLC41A1Q8IVJ1 513 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 GLIS1Q8NBF1 620 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 SUMF1Q8NBK3 374 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 MCUQ8NE86 351 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 LPCAT1Q8NF37 534 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 CXorf40AQ8TE69 158 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 PIH1D2Q8WWB5 315 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 IFT81Q8WYA0 676 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 BIRC7Q96CA5 298 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 OXNAD1Q96HP4 312 aaPredicted RBP15.58■□□□□ 0.08
SS18-216ENST00000580751 MCCC1Q96RQ3 725 aaPredicted RBP15.58■□□□□ 0.08
SS18-216ENST00000580751 FSD1LQ9BXM9 530 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 RAB6BQ9NRW1 208 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 ZDHHC18Q9NUE0 388 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 UBP1Q9NZI7 540 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 ITM2BQ9Y287 266 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 OTOGLQ3ZCN5 2332 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 A0A0J9YYE9 177 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 A0A1W2PQU0 124 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 F5H423 210 aaPredicted RBP15.57■□□□□ 0.08
SS18-216ENST00000580751 NDST3O95803 873 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 PRLP01236 227 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 EPOP01588 193 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 TRBC1P01850 177 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 LMNAP02545 664 aaKnown RBP15.57■□□□□ 0.08
SS18-216ENST00000580751 IGHV4-34P06331 123 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 PDHA1P08559 390 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 H2AFXP16104 143 aaPredicted RBP15.57■□□□□ 0.08
SS18-216ENST00000580751 CARSP49589 748 aaKnown RBP15.57■□□□□ 0.08
SS18-216ENST00000580751 PPP2CBP62714 309 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 PPP2CAP67775 309 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 SARNPP82979 210 aaKnown RBP15.57■□□□□ 0.08
SS18-216ENST00000580751 HLTFQ14527 1009 aaKnown RBP eCLIP15.57■□□□□ 0.08
SS18-216ENST00000580751 TRIP13Q15645 432 aaPredicted RBP15.57■□□□□ 0.08
SS18-216ENST00000580751 LPAL2Q16609 132 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 TMEM52BQ4KMG9 183 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 SETMARQ53H47 684 aaPredicted RBP15.57■□□□□ 0.08
SS18-216ENST00000580751 IZUMO3Q5VZ72 239 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 ARMC3Q5W041 872 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 KDELC1Q6UW63 502 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 CYP2U1Q7Z449 544 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 DEFB119Q8N690 84 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 IPMKQ8NFU5 416 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 SNX19Q92543 992 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 RMDN1Q96DB5 314 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 SCRN2Q96FV2 425 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 TRIB3Q96RU7 358 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 TRIM31Q9BZY9 425 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 DPH5Q9H2P9 285 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 RAPGEFL1Q9UHV5 662 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 GGT7Q9UJ14 662 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 GMEB2Q9UKD1 530 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 PPIL1Q9Y3C6 166 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 PCDHGA5Q9Y5G8 931 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 GON4LQ3T8J9 2241 aa15.57■□□□□ 0.08
SS18-216ENST00000580751 ESYT3A0FGR9 886 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 CAPN8A6NHC0 703 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 ANKRD66B4E2M5 251 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 PPFIA2O75334 1257 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 EPN2O95208 641 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 METTL18O95568 372 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 PRKCGP05129 697 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 ETS1P14921 441 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 CD27P26842 260 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 ECHS1P30084 290 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 VIPR1P32241 457 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 HOXD12P35452 270 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 ITGA8P53708 1063 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 PLTPP55058 493 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 SLMAPQ14BN4 828 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 TMEM259Q4ZIN3 620 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 ZDHHC24Q6UX98 284 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 RELL1Q8IUW5 271 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 RGL4Q8IZJ4 473 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 ZCCHC9Q8N567 271 aaKnown RBP15.56■□□□□ 0.08
SS18-216ENST00000580751 NAT8LQ8N9F0 302 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 DNASE2BQ8WZ79 361 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 CPT1BQ92523 772 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 ANKRD7Q92527 254 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 CAVIN3Q969G5 261 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms