RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 GLOD4Q9HC38 313 aa9.95□□□□□ -0.82
GGA3-209ENST00000580646 AASDHPPTQ9NRN7 309 aa9.95□□□□□ -0.82
GGA3-209ENST00000580646 SEPT10Q9P0V9 454 aa9.95□□□□□ -0.82
GGA3-209ENST00000580646 PCOLCE2Q9UKZ9 415 aa9.95□□□□□ -0.82
GGA3-209ENST00000580646 DNPEPQ9ULA0 475 aa9.95□□□□□ -0.82
GGA3-209ENST00000580646 PHTF1Q9UMS5 762 aa9.95□□□□□ -0.82
GGA3-209ENST00000580646 R3HDM2Q9Y2K5 976 aaKnown RBP9.95□□□□□ -0.82
GGA3-209ENST00000580646 SAR1BQ9Y6B6 198 aa9.95□□□□□ -0.82
GGA3-209ENST00000580646 ADAMTS9Q9P2N4 1935 aa9.95□□□□□ -0.82
GGA3-209ENST00000580646 BPTFQ12830 3046 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 ZNF106Q9H2Y7 1883 aaKnown RBP9.94□□□□□ -0.82
GGA3-209ENST00000580646 A0A1W2PR77 199 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 KCNN4O15554 427 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 FLRT2O43155 660 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 TSPAN6O43657 245 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 DFNA5O60443 496 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 PGLSO95336 258 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 TRIM16O95361 564 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 EPOP01588 193 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 MAT2AP31153 395 aaKnown RBP9.94□□□□□ -0.82
GGA3-209ENST00000580646 CD68P34810 354 aaPredicted RBP9.94□□□□□ -0.82
GGA3-209ENST00000580646 SKOR1P84550 965 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 DSC2Q02487 901 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 NIPAL4Q0D2K0 466 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 TRAF2Q12933 501 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 MPP3Q13368 585 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 ANKRD20A2Q5SQ80 823 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 CFAP58Q5T655 872 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 ANKRD20A1Q5TYW2 823 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 ANKRD20A3Q5VUR7 823 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 NAPEPLDQ6IQ20 393 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 KIAA1161Q6NSJ0 714 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 C4orf22Q6V702 233 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 PID1Q7Z2X4 250 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 RAVER1Q8IY67 606 aaKnown RBP9.94□□□□□ -0.82
GGA3-209ENST00000580646 NDUFAF2Q8N183 169 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 RHBDD1Q8TEB9 315 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 COG1Q8WTW3 980 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 ASB12Q8WXK4 309 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 NSMCE3Q96MG7 304 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 SPATA13Q96N96 652 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 AGAP3Q96P47 875 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 SCNM1Q9BWG6 230 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 GBA3Q9H227 469 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 KLHL8Q9P2G9 620 aaPredicted RBP9.94□□□□□ -0.82
GGA3-209ENST00000580646 DMTF1Q9Y222 760 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 TTLL3Q9Y4R7 772 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 PCDHGC4Q9Y5F7 938 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 RAI2Q9Y5P3 530 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 FADS3Q9Y5Q0 445 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 SPEGQ15772 3267 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 FAM208BQ5VWN6 2430 aa9.94□□□□□ -0.82
GGA3-209ENST00000580646 FRYQ5TBA9 3013 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 ZFYVE26Q68DK2 2539 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 GOLGA6L10A0A0M3HER8 536 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 A0A1B0GTQ1 180 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 TLR4O00206 839 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 FANCGO15287 622 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 HYAL3O43820 417 aaPredicted RBP9.93□□□□□ -0.82
GGA3-209ENST00000580646 PCDHGA12O60330 932 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 RNGTTO60942 597 aaKnown RBP9.93□□□□□ -0.82
GGA3-209ENST00000580646 ANXA9O76027 345 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 CPP00450 1065 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 TIMP2P16035 220 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 NFKB1P19838 968 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 CASQ1P31415 396 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 ACTN2P35609 894 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 CD86P42081 329 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 FNTAP49354 379 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 CCT8P50990 548 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 GABPB1Q06547 395 aaPredicted RBP9.93□□□□□ -0.82
GGA3-209ENST00000580646 IHHQ14623 411 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 AGERQ15109 404 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 PARP6Q2NL67 630 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 TMEM52BQ4KMG9 183 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 PRAMEF14Q5SWL7 426 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 ARMC12Q5T9G4 340 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 ERAP2Q6P179 960 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 GLRX5Q86SX6 157 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 TTC7BQ86TV6 843 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 ZSWIM9Q86XI8 627 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 CREG2Q8IUH2 290 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 C17orf53Q8N3J3 647 aaPredicted RBP9.93□□□□□ -0.82
GGA3-209ENST00000580646 CHCHD4Q8N4Q1 142 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 PRELID2Q8N945 189 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 MFSD2AQ8NA29 543 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 PIH1D2Q8WWB5 315 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 ATG4AQ8WYN0 398 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 MS4A14Q96JA4 679 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 FEM1CQ96JP0 617 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 MCCC1Q96RQ3 725 aaPredicted RBP9.93□□□□□ -0.82
GGA3-209ENST00000580646 LYSMD1Q96S90 227 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 SRPK1Q96SB4 655 aaKnown RBP9.93□□□□□ -0.82
GGA3-209ENST00000580646 ELF4Q99607 663 aaPredicted RBP9.93□□□□□ -0.82
GGA3-209ENST00000580646 CDC6Q99741 560 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 FAM118BQ9BPY3 351 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 TMEM121Q9BTD3 319 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 CEP41Q9BYV8 373 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 PCDH9Q9HC56 1237 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 GDF3Q9NR23 364 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms