RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 ERI2A8K979 691 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 H3BQ06 376 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ALDH1A2O94788 518 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CYP17A1P05093 508 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ITGA2BP08514 1039 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ARFIP2P53365 341 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 BLMHQ13867 455 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SEPT6Q14141 434 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 GEN1Q17RS7 908 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SIRPB2Q5JXA9 342 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CCDC117Q8IWD4 279 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 FBXO27Q8NI29 283 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CYB5D2Q8WUJ1 264 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 FATE1Q969F0 183 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 LRCH3Q96II8 777 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 KXD1Q9BQD3 176 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 S1PR5Q9H228 398 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 MTG2Q9H4K7 406 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ZDHHC4Q9NPG8 344 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 TXLNGQ9NUQ3 528 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 DZANK1Q9NVP4 752 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 GTSE1Q9NYZ3 720 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 KCTD3Q9Y597 815 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SOX1O00570 391 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 LIN7AO14910 233 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ALDOAP04075 364 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 MYL2P10916 166 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 FCARP24071 287 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CALRP27797 417 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 TYK2P29597 1187 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SLC6A11P48066 632 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 RHOAP61586 193 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CCDC15Q0P6D6 951 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 BST1Q10588 318 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 MPP3Q13368 585 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 EML3Q32P44 896 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 HSP90AA5PQ58FG0 334 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 DGKKQ5KSL6 1271 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ATAT1Q5SQI0 421 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PARM1Q6UWI2 310 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 TMEM184AQ6ZMB5 413 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 KLHDC8BQ8IXV7 354 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 DCAF4L2Q8NA75 395 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 BPIFB1Q8TDL5 484 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 FGF14Q92915 247 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ZNF599Q96NL3 588 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 AGAP2Q99490 1192 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 FAM167BQ9BTA0 163 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 C2orf49Q9BVC5 232 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 LRMDAQ9H2I8 198 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 POMKQ9H5K3 350 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 TBC1D14Q9P2M4 693 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 LHX3Q9UBR4 397 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ZNF821O75541 412 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 POU2F2P09086 479 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CR2P20023 1033 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CNTFP26441 200 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CRHR1P34998 444 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CCNFP41002 786 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CCNG1P51959 295 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SESN3P58005 492 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 HSF5Q4G112 596 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PPM1JQ5JR12 505 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SPANXN3Q5MJ09 141 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ESRP1Q6NXG1 681 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 STRA8Q7Z7C7 330 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SPNS2Q8IVW8 549 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ZNF366Q8N895 744 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 OSCP1Q8WVF1 389 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 DENND2DQ9H6A0 471 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SCUBE2Q9NQ36 999 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PLSCR2Q9NRY7 297 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 EVLQ9UI08 416 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ZCWPW2A0A1B0GU75 182 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 AURKAO14965 403 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SLC4A1P02730 911 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SERPINF2P08697 491 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ATXN1LP0C7T5 689 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SAT1P21673 171 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PGGT1BP53609 377 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SEMG2Q02383 582 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CDK18Q07002 472 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CCDC85BQ15834 202 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ANKRD20A4Q4UJ75 823 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 N4BP2L1Q5TBK1 243 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ATG16L1Q676U5 607 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 VITQ6UXI7 678 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CMC1Q7Z7K0 106 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 LINC00523Q86TU6 105 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ADIPOR2Q86V24 386 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CAMK1DQ8IU85 385 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 TADA1Q96BN2 335 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 RETREG1Q9H6L5 497 aa12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 C20orf96Q9NUD7 363 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CHD5Q8TDI0 1954 aa12.73□□□□□ -0.37
CDK5RAP3-217ENST00000580287 WFS1O76024 890 aa12.73□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PRLP01236 227 aa12.73□□□□□ -0.37
CDK5RAP3-217ENST00000580287 DLDP09622 509 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PABPC1P11940 636 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms