RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 RPL6Q02878 288 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SPARCL1Q14515 664 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TMEM52BQ4KMG9 183 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 DNAJC21Q5F1R6 531 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TEX35Q5T0J7 233 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 FAM182AQ5T1J6 154 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SYCP2LQ5T4T6 812 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ZDHHC20Q5W0Z9 365 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 DUPD1Q68J44 220 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TBC1D3GQ6DHY5 549 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TBC1D3CQ6IPX1 549 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ZC3H14Q6PJT7 736 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TSSK4Q6SA08 328 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 GLT6D1Q7Z4J2 308 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ZSWIM9Q86XI8 627 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TBC1D3Q8IZP1 549 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PDIK1LQ8N165 341 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 NAT8LQ8N9F0 302 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 NOA1Q8NC60 698 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PPHLN1Q8NEY8 458 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 OR52K1Q8NGK4 314 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 BLOC1S5Q8TDH9 187 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SEC14L1Q92503 715 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RUBCNQ92622 972 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TOE1Q96GM8 510 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 LYSMD1Q96S90 227 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 APOL2Q9BQE5 337 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 GPR63Q9BZJ6 419 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 IL22Q9GZX6 179 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TSPYL1Q9H0U9 437 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ZFYVE1Q9HBF4 777 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RAD18Q9NS91 495 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ZSCAN32Q9NX65 697 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PKD2L2Q9NZM6 624 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SAMD15Q9P1V8 674 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 B4GALT6Q9UBX8 382 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 MTRF1LQ9UGC7 380 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SNX24Q9Y343 169 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 FADS3Q9Y5Q0 445 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 GVINP1Q7Z2Y8 2422 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ABCA7Q8IZY2 2146 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 IGHV1OR15-9A0A0B4J2B8 117 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 C1orf232A0A0U1RR37 186 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 HEATR9A2RTY3 570 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 FAM47DPA6NHR8 397 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PLK4O00444 970 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 AREL1O15033 823 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 LZTS3O60299 673 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RNGTTO60942 597 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 USP12O75317 370 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PPFIA2O75334 1257 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RPP40O75818 363 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TM7SF2O76062 418 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PRLP01236 227 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SP9P0CG40 484 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TDGF1P13385 188 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 MCM3P25205 808 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RPL21P46778 160 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 METAP1P53582 386 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ITGA8P53708 1063 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ARL4CP56559 192 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 MRPS25P82663 173 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SLC7A5Q01650 507 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CBLBQ13191 982 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SGCGQ13326 291 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CUL1Q13616 776 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 IHHQ14623 411 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 MAP7D1Q3KQU3 841 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SETMARQ53H47 684 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SPDYCQ5MJ68 293 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 HIBCHQ6NVY1 386 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CEP68Q76N32 757 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 NLRP9Q7RTR0 991 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 DGLUCYQ7Z3D6 616 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CADM4Q8NFZ8 388 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 BRSK1Q8TDC3 778 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 UBXN4Q92575 508 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 FOXJ1Q92949 421 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 VOPP1Q96AW1 172 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 NSMCE3Q96MG7 304 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 FOXP3Q9BZS1 431 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 EPB41L5Q9HCM4 733 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CASS4Q9NQ75 786 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 WSB2Q9NYS7 404 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SERGEFQ9UGK8 458 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PKP3Q9Y446 797 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ZNF711Q9Y462 761 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PCDHGA2Q9Y5H1 932 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ZNF292O60281 2723 aa11.3□□□□□ -0.6
CDK5RAP3-210ENST00000578733 WDR87Q6ZQQ6 2873 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 MAGEB16A2A368 324 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RGSL1A5PLK6 1076 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 MEI4A8MW99 385 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 GOLGA8MH3BSY2 632 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RHOBTB1O94844 696 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TMEM63AO94886 807 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PYGLP06737 847 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ALPIP09923 528 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RHOXF2BP0C7M4 288 aa11.29□□□□□ -0.6
CDK5RAP3-210ENST00000578733 IVDP26440 423 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms