RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 NPHS1O60500 1241 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 GREM1O60565 184 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 PENKP01210 267 aaPredicted RBP11.15□□□□□ -0.62
SKA2-204ENST00000578519 SLC35E2BP0CK96 405 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 GABRB3P28472 473 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 MZF1P28698 734 aaPredicted RBP11.15□□□□□ -0.62
SKA2-204ENST00000578519 SERPINA4P29622 427 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 CSRP3P50461 194 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 SGSHP51688 502 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 AQP5P55064 265 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 TAS2R39P59534 338 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 ERVFC1P60507 584 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 PRKAA1Q13131 559 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 PDAP1Q13442 181 aaKnown RBP11.15□□□□□ -0.62
SKA2-204ENST00000578519 ITGA9Q13797 1035 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 METTL21CQ5VZV1 264 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 CNSTQ6PJW8 725 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 PIWIL4Q7Z3Z4 852 aaKnown RBP11.15□□□□□ -0.62
SKA2-204ENST00000578519 MTDHQ86UE4 582 aaKnown RBP11.15□□□□□ -0.62
SKA2-204ENST00000578519 BBS7Q8IWZ6 715 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 C7orf61Q8IZ16 206 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 NKAPQ8N5F7 415 aaKnown RBP11.15□□□□□ -0.62
SKA2-204ENST00000578519 TTC16Q8NEE8 873 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 RFWD2Q8NHY2 731 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 ADAMTS19Q8TE59 1207 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 STON2Q8WXE9 905 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 DNAJC1Q96KC8 554 aaKnown RBP11.15□□□□□ -0.62
SKA2-204ENST00000578519 CNDP1Q96KN2 507 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 RMDN2Q96LZ7 410 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 ASB2Q96Q27 587 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 TMEM237Q96Q45 408 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 SLC22A12Q96S37 553 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 OMDQ99983 421 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 SLC46A2Q9BY10 475 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 MAN1C1Q9NR34 630 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 TDP1Q9NUW8 608 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 TAS2R13Q9NYV9 303 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 DNMT3BQ9UBC3 853 aaKnown RBP11.15□□□□□ -0.62
SKA2-204ENST00000578519 LHX3Q9UBR4 397 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 APPL1Q9UKG1 709 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 TRIM33Q9UPN9 1127 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 DNAJC16Q9Y2G8 782 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 RAP2CQ9Y3L5 183 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 DOCK4Q8N1I0 1966 aa11.15□□□□□ -0.62
SKA2-204ENST00000578519 TTC24A2A3L6 582 aaPredicted RBP11.14□□□□□ -0.63
SKA2-204ENST00000578519 CCDC162PA2VCL2 907 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 LINC01553A4QN01 128 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 G3V2L1 256 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 H7C0S8 307 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 PHGDHO43175 533 aaKnown RBP11.14□□□□□ -0.63
SKA2-204ENST00000578519 SNAP91O60641 907 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 GSRP00390 522 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 RHOP08100 348 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 SERPINA6P08185 405 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 LINC00271P0C7V0 271 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 TPBGLP0DKB5 382 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 HSPA1AP0DMV8 641 aaKnown RBP11.14□□□□□ -0.63
SKA2-204ENST00000578519 HSPA1BP0DMV9 641 aaKnown RBP11.14□□□□□ -0.63
SKA2-204ENST00000578519 ESRRAP11474 423 aaPredicted RBP11.14□□□□□ -0.63
SKA2-204ENST00000578519 NQO1P15559 274 aaKnown RBP11.14□□□□□ -0.63
SKA2-204ENST00000578519 CD9P21926 228 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 CALB2P22676 271 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 GLDCP23378 1020 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 PTPN4P29074 926 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 RECQLP46063 649 aaPredicted RBP11.14□□□□□ -0.63
SKA2-204ENST00000578519 ZNF140P52738 457 aaPredicted RBP11.14□□□□□ -0.63
SKA2-204ENST00000578519 ATP6V0D1P61421 351 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 POLR2LP62875 67 aaKnown RBP11.14□□□□□ -0.63
SKA2-204ENST00000578519 SMAD1Q15797 465 aaKnown RBP11.14□□□□□ -0.63
SKA2-204ENST00000578519 TYSND1Q2T9J0 566 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 PLEKHG6Q3KR16 790 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 ZDHHC20Q5W0Z9 365 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 TPGS1Q6ZTW0 290 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 UBE2Q1Q7Z7E8 422 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 CLNKQ7Z7G1 428 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 PLPP6Q8IY26 295 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 PLD6Q8N2A8 252 aaKnown RBP11.14□□□□□ -0.63
SKA2-204ENST00000578519 FSTL5Q8N475 847 aaPredicted RBP11.14□□□□□ -0.63
SKA2-204ENST00000578519 PCDH20Q8N6Y1 951 aaKnown RBP11.14□□□□□ -0.63
SKA2-204ENST00000578519 OR4K2Q8NGD2 314 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 OR52K2Q8NGK3 314 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 KCTD4Q8WVF5 259 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 WBP2Q969T9 261 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 NXNL1Q96CM4 212 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 ALG14Q96F25 216 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 MYO19Q96H55 970 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 TRMOQ9BU70 441 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 C1QTNF1Q9BXJ1 281 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 DRC3Q9H069 523 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 LMAN2LQ9H0V9 348 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 PIDD1Q9HB75 910 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.14□□□□□ -0.63
SKA2-204ENST00000578519 LNPEPQ9UIQ6 1025 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 GGT7Q9UJ14 662 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 PCDHGC4Q9Y5F7 938 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 ARL5AQ9Y689 179 aa11.14□□□□□ -0.63
SKA2-204ENST00000578519 NYNRINQ9P2P1 1898 aaKnown RBP11.14□□□□□ -0.63
SKA2-204ENST00000578519 TRPC5OSA6NMA1 111 aa11.13□□□□□ -0.63
SKA2-204ENST00000578519 H3BMM5 538 aa11.13□□□□□ -0.63
SKA2-204ENST00000578519 CLASP2O75122 1294 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms