RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 SMAD6O43541 496 aaKnown RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 NOBOXO60393 691 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 SNAP91O60641 907 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 RHOBTB3O94955 611 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 TNFSF15O95150 251 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 MT-CO1P00395 513 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 GP1BAP07359 652 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 VDRP11473 427 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 SRCP12931 536 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 KRT13P13646 458 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 HGFP14210 728 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 HNRNPA2B1P22626 353 aaKnown RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 PSMC2P35998 433 aaKnown RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 ME1P48163 572 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 CSRP3P50461 194 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 CYP4F2P78329 520 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 E2F1Q01094 437 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 OVGP1Q12889 678 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 ZNF177Q13360 481 aaPredicted RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 EIF4EBP2Q13542 120 aaPredicted RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 FZD2Q14332 565 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 STAT4Q14765 748 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 TAF5Q15542 800 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 TCEA2Q15560 299 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 DEFB133Q30KQ1 61 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 DCAF17Q5H9S7 520 aaPredicted RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 OTUD1Q5VV17 481 aaPredicted RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 RNF219Q5W0B1 726 aaPredicted RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 MRM1Q6IN84 353 aaKnown RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 TMEM270Q6UE05 265 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 LCLAT1Q6UWP7 414 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 PTAR1Q7Z6K3 402 aaPredicted RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 ABI3BPQ7Z7G0 1075 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 B3GNT8Q7Z7M8 397 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 C14orf80Q86SX3 495 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 CLEC14AQ86T13 490 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 VASH2Q86V25 355 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 HORMAD1Q86X24 394 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 ARHGEF19Q8IW93 802 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 UNC45BQ8IWX7 931 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 SLC35F3Q8IY50 421 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 CEP57L1Q8IYX8 460 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 ARHGEF39Q8N4T4 335 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 SH2D3CQ8N5H7 860 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 ZNF557Q8N988 423 aaPredicted RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 CCDC150Q8NCX0 1101 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 HTR3CQ8WXA8 447 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 OR8D1Q8WZ84 308 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 IRGQQ8WZA9 623 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 AZIN2Q96A70 460 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 VOPP1Q96AW1 172 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 PPP1R13BQ96KQ4 1090 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 BMFQ96LC9 184 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 ZNF396Q96N95 335 aaPredicted RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 SLC46A1Q96NT5 459 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 SERPINB11Q96P15 392 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 PSMB7Q99436 277 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 DPH1Q9BZG8 443 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 SYNDIG1Q9H7V2 258 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 PREBQ9HCU5 417 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 ANLNQ9NQW6 1124 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 STARD5Q9NSY2 213 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 DNAJC28Q9NX36 388 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 NLGN3Q9NZ94 848 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 HESX1Q9UBX0 185 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 IL17BQ9UHF5 180 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 HPSEQ9Y251 543 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 ITM2BQ9Y287 266 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 PCDHGA8Q9Y5G5 932 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 OR51B4Q9Y5P0 310 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 SNX10Q9Y5X0 201 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 MYO9AB2RTY4 2548 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 UNC13CQ8NB66 2214 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 LRBAP50851 2863 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 TEP1Q99973 2627 aaKnown RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 SYNJ2BP-COX16A0A087WUM0 186 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 CCDC187A0A096LP49 1063 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 EME2A4GXA9 379 aaPredicted RBP4.02□□□□□ -1.77
PTPRM-206ENST00000578093 A6NNZ2 444 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 WASH4PA8MWX3 477 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 E5RJQ4 531 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 C1QTNF3-AMACRE9PGA6 284 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 F5H5T6 163 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 KPNA3O00505 521 aaPredicted RBP4.02□□□□□ -1.77
PTPRM-206ENST00000578093 MCF2LO15068 1137 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 SCAMP1O15126 338 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 MUSKO15146 869 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 MAGEC1O60732 1142 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 GCATO75600 419 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 CNTN5O94779 1100 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 KCNH1O95259 989 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 MOCS3O95396 460 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 TRUB2O95900 331 aaKnown RBP4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ESR1P03372 595 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 CSF2P04141 144 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 CD3EP07766 207 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ALPPL2P10696 532 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ITIH1P19827 911 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 FUT4P22083 530 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 RRM1P23921 792 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms