RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 WASH2PQ6VEQ5 465 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CERS6Q6ZMG9 384 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 C1orf186Q6ZWK4 172 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SERINC5Q86VE9 423 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 TMC8Q8IU68 726 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 P3H2Q8IVL5 708 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 GSPT2Q8IYD1 628 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PCDH20Q8N6Y1 951 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 VGLL2Q8N8G2 317 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 TXNDC5Q8NBS9 432 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 FBXO15Q8NCQ5 510 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 HIPK4Q8NE63 616 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 C7orf57Q8NEG2 295 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 FRS2Q8WU20 508 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 MRPL38Q96DV4 380 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM120BQ96EK7 910 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF354BQ96LW1 612 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 HIST1H2AAQ96QV6 131 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CMKLR1Q99788 373 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CLSTN3Q9BQT9 956 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 DUSP23Q9BVJ7 150 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PHF7Q9BWX1 381 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF717Q9BY31 904 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 ILKAPQ9H0C8 392 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PCDH9Q9HC56 1237 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PNPLA8Q9NP80 782 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PSMC3IPQ9P2W1 217 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 DCDC2Q9UHG0 476 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PCDHGC3Q9UN70 934 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SNX7Q9UNH6 387 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SMG5Q9UPR3 1016 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SORCS3Q9UPU3 1222 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 HPSEQ9Y251 543 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 A0A1B0GUA9 196 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 KLRG2A4D1S0 409 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 C5orf60A6NFR6 353 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 TTLL8A6PVC2 850 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 TRAFD1O14545 582 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 PJA2O43164 708 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 CDH16O75309 829 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 AKAP3O75969 853 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 HAUS5O94927 633 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 FESP07332 822 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM163BP0C2L3 166 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 ERCC2P18074 760 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 CNTFP26441 200 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 MAGEA9P43362 315 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 VAC14Q08AM6 782 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 CSTF3Q12996 717 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 ITGB3BPQ13352 177 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 NFATC2Q13469 925 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 SHHQ15465 462 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 ATP6AP1LQ52LC2 224 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 TMEM63BQ5T3F8 832 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC9A4Q6AI14 798 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 TAPT1Q6NXT6 567 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 LRRC8BQ6P9F7 803 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 VASH1Q7L8A9 365 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 ADAMTSL2Q86TH1 951 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 CAMK1DQ8IU85 385 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF555Q8NEP9 628 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 OR4K17Q8NGC6 315 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 STAG3L4Q8TBR4 150 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 PROX1Q92786 737 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 DLG3Q92796 817 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 RAB7BQ96AH8 199 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 CENPTQ96BT3 561 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 HMCESQ96FZ2 354 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 B3GALT6Q96L58 329 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 PPP1R36Q96LQ0 422 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 C9orf72Q96LT7 481 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 NMUR1Q9HB89 426 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 ABCB6Q9NP58 842 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 OSGEPQ9NPF4 335 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 TMPRSS4Q9NRS4 437 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 SEMA3GQ9NS98 782 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 WARS2Q9UGM6 360 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 RAI2Q9Y5P3 530 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 GON4LQ3T8J9 2241 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 TMEM191CA6NGB0 347 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 TK2O00142 265 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 LEFTY2O00292 366 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 WWP2O00308 870 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 PRMT5O14744 637 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 ZBTB39O15060 712 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 MUSKO15146 869 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 CD3EAPO15446 510 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 YKT6O15498 198 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 MSI1O43347 362 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 SYNGR4O95473 234 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 SEMA4FO95754 770 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 SNAI1O95863 264 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 TOP3BO95985 862 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 GIMD1P0DJR0 217 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 WARSP23381 471 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 MIPP30301 263 aa2.93□□□□□ -1.94
SMCHD1-203ENST00000577880 GGCXP38435 758 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms