RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 IQCKQ8N0W5 287 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 RYBPQ8N488 228 aaPredicted RBP10.14□□□□□ -0.79
CRLF3-202ENST00000577725 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.14□□□□□ -0.79
CRLF3-202ENST00000577725 KIAA1958Q8N8K9 716 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 EPS8L3Q8TE67 593 aaKnown RBP10.14□□□□□ -0.79
CRLF3-202ENST00000577725 E2F7Q96AV8 911 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 TADA1Q96BN2 335 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 MRRFQ96E11 262 aaKnown RBP10.14□□□□□ -0.79
CRLF3-202ENST00000577725 STAMBPL1Q96FJ0 436 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 CRELD1Q96HD1 420 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 NUDCD1Q96RS6 583 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 TRMT61BQ9BVS5 477 aaKnown RBP10.14□□□□□ -0.79
CRLF3-202ENST00000577725 FSD1LQ9BXM9 530 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 FRMD8Q9BZ67 464 aaPredicted RBP10.14□□□□□ -0.79
CRLF3-202ENST00000577725 CIPCQ9C0C6 399 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 DUSP15Q9H1R2 295 aaPredicted RBP10.14□□□□□ -0.79
CRLF3-202ENST00000577725 MTG2Q9H4K7 406 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 VIPAS39Q9H9C1 493 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 PLAC1Q9HBJ0 212 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 EVLQ9UI08 416 aaPredicted RBP10.14□□□□□ -0.79
CRLF3-202ENST00000577725 SLCO3A1Q9UIG8 710 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 SLC25A13Q9UJS0 675 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 FBXO10Q9UK96 956 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 ERVW-1Q9UQF0 538 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 CHKBQ9Y259 395 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 AAR2Q9Y312 384 aaKnown RBP10.14□□□□□ -0.79
CRLF3-202ENST00000577725 NFS1Q9Y697 457 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 A0A087WV48 116 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 SDR42E2A6NKP2 422 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 ERI2A8K979 691 aaKnown RBP10.13□□□□□ -0.79
CRLF3-202ENST00000577725 TTC34A8MYJ7 566 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 PRRT4C9JH25 899 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 H3BQF6 201 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 ATP8B1O43520 1251 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 ZNF821O75541 412 aaPredicted RBP10.13□□□□□ -0.79
CRLF3-202ENST00000577725 SERPINF2P08697 491 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 ATXN1LP0C7T5 689 aaKnown RBP10.13□□□□□ -0.79
CRLF3-202ENST00000577725 PIRTP0C851 137 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 MLNP12872 115 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 GJA4P35212 333 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 SLCO1A2P46721 670 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 PXNP49023 591 aaPredicted RBP10.13□□□□□ -0.79
CRLF3-202ENST00000577725 ECT2LQ008S8 904 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 IFFO1Q0D2I5 559 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 CDH17Q12864 832 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 POU6F1Q14863 301 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 PTPRRQ15256 657 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 SKIDA1Q1XH10 827 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 SIRPB2Q5JXA9 342 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 ALS2CLQ60I27 953 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 ALG1LQ6GMV1 187 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 NCEH1Q6PIU2 408 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 LRIG3Q6UXM1 1119 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 UNC5AQ6ZN44 842 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 UNC5BQ8IZJ1 945 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 AHI1Q8N157 1196 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 SH2D3CQ8N5H7 860 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 ZNF366Q8N895 744 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 LPCAT1Q8NF37 534 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 FBF1Q8TES7 1133 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 WFIKKN2Q8TEU8 576 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 PDCD6IPQ8WUM4 868 aaKnown RBP10.13□□□□□ -0.79
CRLF3-202ENST00000577725 TTC17Q96AE7 1141 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 ACDQ96AP0 544 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 ARL8AQ96BM9 186 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 ERLEC1Q96DZ1 483 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 CHFRQ96EP1 664 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 IFT43Q96FT9 208 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 MSANTD3Q96H12 275 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 MRGPRX3Q96LB0 322 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 TTC25Q96NG3 672 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 RUFY1Q96T51 708 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 EBNA1BP2Q99848 306 aaKnown RBP10.13□□□□□ -0.79
CRLF3-202ENST00000577725 SLC2A11Q9BYW1 496 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 PHACTR1Q9C0D0 580 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 CENPHQ9H3R5 247 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 ZDHHC4Q9NPG8 344 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 IL1RAPL1Q9NZN1 696 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 DEC1Q9P2X7 70 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 ZC3H7BQ9UGR2 993 aaKnown RBP10.13□□□□□ -0.79
CRLF3-202ENST00000577725 PCDHGC4Q9Y5F7 938 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 CFAP46Q8IYW2 2715 aa10.13□□□□□ -0.79
CRLF3-202ENST00000577725 ATG2BQ96BY7 2078 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 A0A087WUV0 522 aaPredicted RBP10.12□□□□□ -0.79
CRLF3-202ENST00000577725 TLDC2A0PJX2 215 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 IGSF6O95976 241 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 F7P08709 466 aaPredicted RBP10.12□□□□□ -0.79
CRLF3-202ENST00000577725 ABHD2P08910 425 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 NPY2RP49146 381 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 GEMIN4P57678 1058 aaKnown RBP10.12□□□□□ -0.79
CRLF3-202ENST00000577725 CDK18Q07002 472 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 NR1H3Q13133 447 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 DMC1Q14565 340 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 DLG2Q15700 870 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 LONRF1Q17RB8 773 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 ITPRIPL2Q3MIP1 535 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 KRT71Q3SY84 523 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 INO80DQ53TQ3 878 aaPredicted RBP10.12□□□□□ -0.79
CRLF3-202ENST00000577725 SPDYCQ5MJ68 293 aa10.12□□□□□ -0.79
CRLF3-202ENST00000577725 TRMT10BQ6PF06 316 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms