RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 MAXP61244 160 aa13.88□□□□□ -0.19
RNF43-202ENST00000577625 SMAD3P84022 425 aaKnown RBP13.88□□□□□ -0.19
RNF43-202ENST00000577625 GNA12Q03113 381 aa13.88□□□□□ -0.19
RNF43-202ENST00000577625 MMEL1Q495T6 779 aa13.88□□□□□ -0.19
RNF43-202ENST00000577625 BORAQ6PGQ7 559 aa13.88□□□□□ -0.19
RNF43-202ENST00000577625 KDELC1Q6UW63 502 aa13.88□□□□□ -0.19
RNF43-202ENST00000577625 RANBP10Q6VN20 620 aa13.88□□□□□ -0.19
RNF43-202ENST00000577625 DHDDSQ86SQ9 333 aa13.88□□□□□ -0.19
RNF43-202ENST00000577625 ARL14EPQ8N8R7 260 aaPredicted RBP13.88□□□□□ -0.19
RNF43-202ENST00000577625 SRPK1Q96SB4 655 aaKnown RBP13.88□□□□□ -0.19
RNF43-202ENST00000577625 CPNE1Q99829 537 aa13.88□□□□□ -0.19
RNF43-202ENST00000577625 FSD1LQ9BXM9 530 aa13.88□□□□□ -0.19
RNF43-202ENST00000577625 MAGEH1Q9H213 219 aa13.88□□□□□ -0.19
RNF43-202ENST00000577625 PDFQ9HBH1 243 aa13.88□□□□□ -0.19
RNF43-202ENST00000577625 VPS45Q9NRW7 570 aa13.88□□□□□ -0.19
RNF43-202ENST00000577625 STOML2Q9UJZ1 356 aa13.88□□□□□ -0.19
RNF43-202ENST00000577625 LZTS1Q9Y250 596 aa13.88□□□□□ -0.19
RNF43-202ENST00000577625 PSAT1Q9Y617 370 aa13.88□□□□□ -0.19
RNF43-202ENST00000577625 A0A0G2JND7 137 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 SH3PXD2BA1X283 911 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 GREM1O60565 184 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 CLDN11O75508 207 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 SERPINB7O75635 380 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 CSPG5O95196 566 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 LRG1P02750 347 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 MMP2P08253 660 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 SYN1P17600 705 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 GABRR2P28476 465 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 HALP42357 657 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 NUMBP49757 651 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 ZXDBP98169 803 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 CYP4F8P98187 520 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 MSLNQ13421 630 aaPredicted RBP13.87□□□□□ -0.19
RNF43-202ENST00000577625 SFT2D3Q587I9 215 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 PCID2Q5JVF3 399 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 POTEHQ6S545 545 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 CDHR3Q6ZTQ4 885 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 CCDC149Q6ZUS6 474 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 CHST9Q7L1S5 443 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 HS6ST3Q8IZP7 471 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 PGBD5Q8N414 524 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 KREMEN2Q8NCW0 462 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 ACMSDQ8TDX5 336 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 BTBD9Q96Q07 612 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 MRPS26Q9BYN8 205 aaKnown RBP13.87□□□□□ -0.19
RNF43-202ENST00000577625 C12orf65Q9H3J6 166 aaKnown RBP13.87□□□□□ -0.19
RNF43-202ENST00000577625 TXNDC16Q9P2K2 825 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 NOTCH4Q99466 2003 aa13.87□□□□□ -0.19
RNF43-202ENST00000577625 CHD9Q3L8U1 2897 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 C15orf38-AP3S2A0A0A6YYH1 394 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 A0A1B0GVM2 712 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 TCAF2A6NFQ2 919 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 C2orf71A6NGG8 1288 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 HIDE1A8MVS5 230 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 NRG2O14511 850 aaPredicted RBP13.86□□□□□ -0.19
RNF43-202ENST00000577625 TRMUO75648 421 aaKnown RBP13.86□□□□□ -0.19
RNF43-202ENST00000577625 DNAJB1P25685 340 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 WNT3AP56704 352 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 DSC2Q02487 901 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 IHHQ14623 411 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 SMAD1Q15797 465 aaKnown RBP13.86□□□□□ -0.19
RNF43-202ENST00000577625 CLPPQ16740 277 aaPredicted RBP13.86□□□□□ -0.19
RNF43-202ENST00000577625 NADK2Q4G0N4 442 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 GRTP1Q5TC63 336 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 PLPP4Q5VZY2 271 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 ARPINQ7Z6K5 226 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 OR7D4Q8NG98 312 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 ZFP28Q8NHY6 868 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 PHOSPHO2Q8TCD6 241 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 PTCD2Q8WV60 388 aaKnown RBP13.86□□□□□ -0.19
RNF43-202ENST00000577625 VPS50Q96JG6 964 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 FAM111AQ96PZ2 611 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 ZNHIT2Q9UHR6 403 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 PLLPQ9Y342 182 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 FADS3Q9Y5Q0 445 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 B2RBV5 119 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 MATN2O00339 956 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 SCAMP3O14828 347 aaKnown RBP13.86□□□□□ -0.19
RNF43-202ENST00000577625 TSPAN3O60637 253 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 LATS1O95835 1130 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 HDCP19113 662 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 NMBRP28336 390 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 DLG1Q12959 904 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 BCL2A1Q16548 175 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 DNAL1Q4LDG9 190 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 TEDDM1Q5T9Z0 273 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 PKN3Q6P5Z2 889 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 SPRED2Q7Z698 418 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 KCNMB4Q86W47 210 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 ULK2Q8IYT8 1036 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 ARRDC2Q8TBH0 407 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 TADA1Q96BN2 335 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 ARNT2Q9HBZ2 717 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 MRM3Q9HC36 420 aaKnown RBP13.86□□□□□ -0.19
RNF43-202ENST00000577625 S100A14Q9HCY8 104 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 ATP13A1Q9HD20 1204 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 UTP6Q9NYH9 597 aaKnown RBP13.86□□□□□ -0.19
RNF43-202ENST00000577625 FAF1Q9UNN5 650 aaPredicted RBP13.86□□□□□ -0.19
RNF43-202ENST00000577625 CPQQ9Y646 472 aa13.86□□□□□ -0.19
RNF43-202ENST00000577625 LINC01553A4QN01 128 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms