RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 LIPIQ6XZB0 460 aa12.75□□□□□ -0.37
CDK5RAP3-203ENST00000577442 GCNT7Q6ZNI0 430 aa12.75□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ARHGEF18Q6ZSZ5 1173 aa12.75□□□□□ -0.37
CDK5RAP3-203ENST00000577442 DCP2Q8IU60 420 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-203ENST00000577442 SLC35F6Q8N357 371 aa12.75□□□□□ -0.37
CDK5RAP3-203ENST00000577442 TMEM131Q92545 1883 aa12.75□□□□□ -0.37
CDK5RAP3-203ENST00000577442 TADA1Q96BN2 335 aa12.75□□□□□ -0.37
CDK5RAP3-203ENST00000577442 RMDN1Q96DB5 314 aa12.75□□□□□ -0.37
CDK5RAP3-203ENST00000577442 LYSMD1Q96S90 227 aa12.75□□□□□ -0.37
CDK5RAP3-203ENST00000577442 SRPK1Q96SB4 655 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-203ENST00000577442 NAP1L3Q99457 506 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-203ENST00000577442 HOMER3Q9NSC5 361 aa12.75□□□□□ -0.37
CDK5RAP3-203ENST00000577442 GOLGA6AQ9NYA3 693 aa12.75□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PYCARDQ9ULZ3 195 aa12.75□□□□□ -0.37
CDK5RAP3-203ENST00000577442 R3HDM2Q9Y2K5 976 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-203ENST00000577442 TCRBV7S2A1N4TA0A589 114 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 C5orf60A6NFR6 353 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 NPIPB15A6NHN6 443 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 C4orf47A7E2U8 309 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ENC1O14682 589 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 WNT9AO14904 365 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 GDF9O60383 454 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PMPCBO75439 489 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 RECQL5O94762 991 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 NDST3O95803 873 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PRLP01236 227 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 WNT1P04628 370 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 CTPS1P17812 591 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 STIP1P31948 543 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ACTN2P35609 894 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ARRB1P49407 418 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 CCT8P50990 548 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 WNT3AP56704 352 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 BNC1Q01954 994 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 SEMG2Q02383 582 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 IHHQ14623 411 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PCSK7Q16549 785 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 QPCTQ16769 361 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 RSPO4Q2I0M5 234 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ZNF423Q2M1K9 1284 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 HLA-BQ31612 363 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 P3H1Q32P28 736 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ANKRD20A2Q5SQ80 823 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ANKRD20A1Q5TYW2 823 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ANKRD20A3Q5VUR7 823 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 RAVER1Q8IY67 606 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 FAM71DQ8N9W8 422 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 SPATA22Q8NHS9 363 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ATG4AQ8WYN0 398 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 NUS1Q96E22 293 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 TRIB3Q96RU7 358 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 KLF6Q99612 283 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 RTKNQ9BST9 563 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 MLPHQ9BV36 600 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 FSD1LQ9BXM9 530 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 GAREM1Q9H706 876 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 C10orf88Q9H8K7 445 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ERVMER34-1Q9H9K5 563 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 USP29Q9HBJ7 922 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 FSCN3Q9NQT6 498 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 RXFP3Q9NSD7 469 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 DNAAF2Q9NVR5 837 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 CA5BQ9Y2D0 317 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 COQ6Q9Y2Z9 468 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 AAR2Q9Y312 384 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 SNX11Q9Y5W9 270 aa12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.74□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ARID1BQ8NFD5 2236 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 TDRD6O60522 2096 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 USP27XA6NNY8 438 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ANKRD66B4E2M5 251 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 CDX4O14627 284 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 RAD51BO15315 384 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 LIASO43766 372 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 GCATO75600 419 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 MT-CYBP00156 380 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 EPOP01588 193 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 ALPIP09923 528 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 HLA-DPA1P20036 260 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 LHCGRP22888 699 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PSMB4P28070 264 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 CXCR5P32302 372 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 HNF1BP35680 557 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 IGFALSP35858 605 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 THOP1P52888 689 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 CLDN2P57739 230 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 YPEL5P62699 121 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 SLC14A1Q13336 389 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 MTM1Q13496 603 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 PTK2BQ14289 1009 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 IRF4Q15306 451 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 OASLQ15646 514 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 CCNG2Q16589 344 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 LONRF2Q1L5Z9 754 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 INAVAQ3KP66 663 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 UAP1L1Q3KQV9 507 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 LRRC66Q68CR7 880 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 DRICH1Q6PGQ1 229 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 KDELC1Q6UW63 502 aa12.73□□□□□ -0.37
CDK5RAP3-203ENST00000577442 TP53I13Q8NBR0 393 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms