RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 WASF2Q9Y6W5 498 aa12.49□□□□□ -0.41
TSEN54-204ENST00000577197 TICRRQ7Z2Z1 1910 aa12.49□□□□□ -0.41
TSEN54-204ENST00000577197 EYSQ5T1H1 3165 aa12.49□□□□□ -0.41
TSEN54-204ENST00000577197 ZNF106Q9H2Y7 1883 aaKnown RBP12.48□□□□□ -0.41
TSEN54-204ENST00000577197 TLDC2A0PJX2 215 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 RGSL1A5PLK6 1076 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 POC1B-GALNT4F8VUJ3 575 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 TRIM24O15164 1050 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 PFDN6O15212 129 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 GJB3O75712 270 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 PDHA1P08559 390 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 CYP2A6P11509 494 aaPredicted RBP12.48□□□□□ -0.41
TSEN54-204ENST00000577197 ARNTP27540 789 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 NMBRP28336 390 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 SPRP35270 261 aaPredicted RBP12.48□□□□□ -0.41
TSEN54-204ENST00000577197 SOX9P48436 509 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 GALK1P51570 392 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 MTM1Q13496 603 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 GALNT3Q14435 633 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 ZNF234Q14588 700 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 CNGA3Q16281 694 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 ZNF805Q5CZA5 627 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 FAM182AQ5T1J6 154 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 AFTPHQ6ULP2 937 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 KDM7AQ6ZMT4 941 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 TPRG1Q6ZUI0 275 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 GLT6D1Q7Z4J2 308 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 LCA5Q86VQ0 697 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 RASSF3Q86WH2 238 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 CAMK1DQ8IU85 385 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 TTC30BQ8N4P2 665 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.48□□□□□ -0.41
TSEN54-204ENST00000577197 PPM1NQ8N819 430 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 UHMK1Q8TAS1 419 aaKnown RBP12.48□□□□□ -0.41
TSEN54-204ENST00000577197 FAM76AQ8TAV0 307 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 BLOC1S5Q8TDH9 187 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 MZB1Q8WU39 189 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 OR8D1Q8WZ84 308 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 PPP1R16AQ96I34 528 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 TNKS2Q9H2K2 1166 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 C20orf96Q9NUD7 363 aaPredicted RBP12.48□□□□□ -0.41
TSEN54-204ENST00000577197 PIH1D1Q9NWS0 290 aaKnown RBP12.48□□□□□ -0.41
TSEN54-204ENST00000577197 SMG5Q9UPR3 1016 aaKnown RBP12.48□□□□□ -0.41
TSEN54-204ENST00000577197 CKAP5Q14008 2032 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 TCF20Q9UGU0 1960 aaKnown RBP12.48□□□□□ -0.41
TSEN54-204ENST00000577197 MYLKQ15746 1914 aa12.48□□□□□ -0.41
TSEN54-204ENST00000577197 TTC24A2A3L6 582 aaPredicted RBP12.47□□□□□ -0.41
TSEN54-204ENST00000577197 TTC34A8MYJ7 566 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 H0Y858 1186 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 PSMD11O00231 422 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 CHRM1P11229 460 aaPredicted RBP12.47□□□□□ -0.41
TSEN54-204ENST00000577197 NR1D1P20393 614 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 ITGB7P26010 798 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 LIMK2P53671 638 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 STARD6P59095 220 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 PRAMEP78395 509 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 ZXDAP98168 799 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 KDSRQ06136 332 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 CCDC15Q0P6D6 951 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 GRSF1Q12849 480 aaKnown RBP eCLIP12.47□□□□□ -0.41
TSEN54-204ENST00000577197 CAMK2GQ13555 558 aaPredicted RBP12.47□□□□□ -0.41
TSEN54-204ENST00000577197 THOC5Q13769 683 aaKnown RBP12.47□□□□□ -0.41
TSEN54-204ENST00000577197 SEPT6Q14141 434 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 FNDC3BQ53EP0 1204 aaKnown RBP12.47□□□□□ -0.41
TSEN54-204ENST00000577197 TMEM196Q5HYL7 178 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 AARS2Q5JTZ9 985 aaKnown RBP12.47□□□□□ -0.41
TSEN54-204ENST00000577197 C9orf64Q5T6V5 341 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 RNF187Q5TA31 235 aaPredicted RBP12.47□□□□□ -0.41
TSEN54-204ENST00000577197 FAM46CQ5VWP2 391 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 MRNIPQ6NTE8 343 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 NEPROQ6NW34 567 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 ESRP1Q6NXG1 681 aaKnown RBP12.47□□□□□ -0.41
TSEN54-204ENST00000577197 TXNDC11Q6PKC3 985 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 SERPINA13PQ6UXR4 307 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 PACS1Q6VY07 963 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 ZNF852Q6ZMS4 543 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 CAPN12Q6ZSI9 719 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 CTAGE3PQ8IX95 158 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 RYBPQ8N488 228 aaPredicted RBP12.47□□□□□ -0.41
TSEN54-204ENST00000577197 C2CD4AQ8NCU7 369 aaPredicted RBP12.47□□□□□ -0.41
TSEN54-204ENST00000577197 CYB5D2Q8WUJ1 264 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 FAM3CQ92520 227 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 RAB7BQ96AH8 199 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 CABS1Q96KC9 395 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 ZNF778Q96MU6 729 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 NELL2Q99435 816 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 RBBP8Q99708 897 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 RHOJQ9H4E5 214 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 ZDHHC6Q9H6R6 413 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 SMYD2Q9NRG4 433 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 KCTD5Q9NXV2 234 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 IL17CQ9P0M4 197 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.47□□□□□ -0.41
TSEN54-204ENST00000577197 APPL1Q9UKG1 709 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 PPM1HQ9ULR3 514 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 MRPS17Q9Y2R5 130 aaKnown RBP12.47□□□□□ -0.41
TSEN54-204ENST00000577197 PKP3Q9Y446 797 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 ZNF711Q9Y462 761 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 F5P12259 2224 aa12.47□□□□□ -0.41
TSEN54-204ENST00000577197 MYO10Q9HD67 2058 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms