RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 TSPAN33Q86UF1 283 aa8.35□□□□□ -1.07
CALCOCO2-226ENST00000575461 CEP57L1Q8IYX8 460 aa8.35□□□□□ -1.07
CALCOCO2-226ENST00000575461 XXYLT1Q8NBI6 393 aa8.35□□□□□ -1.07
CALCOCO2-226ENST00000575461 TSPAN14Q8NG11 270 aa8.35□□□□□ -1.07
CALCOCO2-226ENST00000575461 HUS1BQ8NHY5 278 aa8.35□□□□□ -1.07
CALCOCO2-226ENST00000575461 ZNF398Q8TD17 642 aa8.35□□□□□ -1.07
CALCOCO2-226ENST00000575461 SNAPC3Q92966 411 aa8.35□□□□□ -1.07
CALCOCO2-226ENST00000575461 OTULINQ96BN8 352 aa8.35□□□□□ -1.07
CALCOCO2-226ENST00000575461 SLC41A2Q96JW4 573 aa8.35□□□□□ -1.07
CALCOCO2-226ENST00000575461 RITA1Q96K30 269 aa8.35□□□□□ -1.07
CALCOCO2-226ENST00000575461 FNBP1Q96RU3 617 aa8.35□□□□□ -1.07
CALCOCO2-226ENST00000575461 GAD1Q99259 594 aa8.35□□□□□ -1.07
CALCOCO2-226ENST00000575461 FAM110AQ9BQ89 295 aa8.35□□□□□ -1.07
CALCOCO2-226ENST00000575461 THUMPD3Q9BV44 507 aaKnown RBP8.35□□□□□ -1.07
CALCOCO2-226ENST00000575461 CDT1Q9H211 546 aa8.35□□□□□ -1.07
CALCOCO2-226ENST00000575461 A0A1W2PR77 199 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 LNP1A1A4G5 178 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 SLC22A23A1A5C7 686 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 TARM1B6A8C7 271 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 ATP2C2O75185 946 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 MTA2O94776 668 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 UNGP13051 313 aaPredicted RBP8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 ERCC2P18074 760 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 ACADLP28330 430 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 TXKP42681 527 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 CLCN5P51795 746 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 TAS2R40P59535 323 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 HSF1Q00613 529 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 CDSNQ15517 529 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 TTC39AQ5SRH9 613 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 ERN2Q76MJ5 926 aaKnown RBP8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 AACSQ86V21 672 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 WDR63Q8IWG1 891 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 CCDC13Q8IYE1 715 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 TMCO5AQ8N6Q1 288 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 TC2NQ8N9U0 490 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 OR14L1PQ8NHC6 308 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 MRPS27Q92552 414 aaKnown RBP8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 RRNAD1Q96FB5 475 aaKnown RBP8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 TIMP4Q99727 224 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 SLC25A23Q9BV35 468 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 DBNDD1Q9H9R9 158 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 MOV10Q9HCE1 1003 aaKnown RBP8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 RNF146Q9NTX7 359 aa8.34□□□□□ -1.07
CALCOCO2-226ENST00000575461 ZNF335Q9H4Z2 1342 aaPredicted RBP8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 FOXO6A8MYZ6 492 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 AKR1B15C9JRZ8 316 aaPredicted RBP8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 KLK8O60259 260 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 C22orf31O95567 290 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 MMP2P08253 660 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 WT1P19544 449 aaPredicted RBP8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 ANXA7P20073 488 aaKnown RBP8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 HOXC8P31273 242 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 SIM1P81133 766 aaPredicted RBP8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 MRPS34P82930 218 aaKnown RBP8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 DGCR2P98153 550 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 ITGADQ13349 1161 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 SGO1Q5FBB7 561 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 SHQ1Q6PI26 577 aaKnown RBP8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 LINGO2Q7L985 606 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 NOXA1Q86UR1 476 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 SCYL3Q8IZE3 742 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 NUP93Q8N1F7 819 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 BEST2Q8NFU1 509 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 HDAC11Q96DB2 347 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 ZNF503Q96F45 646 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 CEP295NLQ96MC4 621 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 C1QTNF3Q9BXJ4 246 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 MMP27Q9H306 513 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 ST6GALNAC4Q9H4F1 302 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 WNT6Q9Y6F9 365 aa8.33□□□□□ -1.08
CALCOCO2-226ENST00000575461 A0A0G2JLL6 359 aaPredicted RBP8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 WNT1P04628 370 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 MMP3P08254 477 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 ATP5F1P24539 256 aaPredicted RBP8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 TLX1P31314 330 aaPredicted RBP8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 RFC1P35251 1148 aaPredicted RBP8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 PRCPP42785 496 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 MATR3P43243 847 aaKnown RBP eCLIP8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 RAB28P51157 221 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 SUOXP51687 545 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 ARSEP51690 589 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 SORDQ00796 357 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 FOXE3Q13461 319 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 NAE1Q13564 534 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 LETM2Q2VYF4 491 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 ESCO2Q56NI9 601 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 LRIF1Q5T3J3 769 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 TRAT1Q6PIZ9 186 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 HAPLN4Q86UW8 402 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 DENND6AQ8IWF6 608 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 UNC45BQ8IWX7 931 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 ZBTB2Q8N680 514 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 CMASQ8NFW8 434 aaPredicted RBP8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 TRPC4APQ8TEL6 797 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 PIMREGQ9BSJ6 248 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 COPS7BQ9H9Q2 264 aaPredicted RBP8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 SLC28A3Q9HAS3 691 aa8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 MBNL1Q9NR56 388 aaKnown RBP8.32□□□□□ -1.08
CALCOCO2-226ENST00000575461 PAG1Q9NWQ8 432 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms