RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 HNRNPLLQ8WVV9 542 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-213ENST00000573519 SCG3Q8WXD2 468 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-213ENST00000573519 RFFLQ8WZ73 363 aa12.74□□□□□ -0.37
NPLOC4-213ENST00000573519 NUS1Q96E22 293 aa12.74□□□□□ -0.37
NPLOC4-213ENST00000573519 DCBLD2Q96PD2 775 aa12.74□□□□□ -0.37
NPLOC4-213ENST00000573519 SEMA3CQ99985 751 aa12.74□□□□□ -0.37
NPLOC4-213ENST00000573519 POLR1EQ9GZS1 481 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-213ENST00000573519 CLPBQ9H078 707 aa12.74□□□□□ -0.37
NPLOC4-213ENST00000573519 SYNDIG1Q9H7V2 258 aa12.74□□□□□ -0.37
NPLOC4-213ENST00000573519 GOLGA6AQ9NYA3 693 aa12.74□□□□□ -0.37
NPLOC4-213ENST00000573519 GULP1Q9UBP9 304 aa12.74□□□□□ -0.37
NPLOC4-213ENST00000573519 DKK4Q9UBT3 224 aa12.74□□□□□ -0.37
NPLOC4-213ENST00000573519 MOSPD1Q9UJG1 213 aa12.74□□□□□ -0.37
NPLOC4-213ENST00000573519 PHTF1Q9UMS5 762 aa12.74□□□□□ -0.37
NPLOC4-213ENST00000573519 LHX6Q9UPM6 363 aa12.74□□□□□ -0.37
NPLOC4-213ENST00000573519 RAI2Q9Y5P3 530 aa12.74□□□□□ -0.37
NPLOC4-213ENST00000573519 IGF2RP11717 2491 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 CABIN1Q9Y6J0 2220 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 LRRD1A4D1F6 860 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 TNFP01375 233 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 ALPIP09923 528 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 TNNT1P13805 278 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 KELP23276 732 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 KDELR1P24390 212 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 GBE1Q04446 702 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 ARHGEF7Q14155 803 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 CNGA3Q16281 694 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 IFI16Q16666 785 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 ODF2Q5BJF6 829 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 RALGPS1Q5JS13 557 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 C6orf132Q5T0Z8 1188 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 USP45Q70EL2 814 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 GKN2Q86XP6 184 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 RHOT2Q8IXI1 618 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 SLC35F3Q8IY50 421 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 TEX26Q8N6G2 289 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 OR56A4Q8NGH8 313 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 RAPGEF5Q92565 580 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 FUBP1Q96AE4 644 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 PDXPQ96GD0 296 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 TBATAQ96M53 351 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 ZNF830Q96NB3 372 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 DEPDC7Q96QD5 511 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 ANP32EQ9BTT0 268 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 BOCQ9BWV1 1114 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 NRSN2Q9GZP1 204 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 WDR26Q9H7D7 661 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 HAUS2Q9NVX0 235 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 RBM22Q9NW64 420 aaKnown RBP eCLIP12.73□□□□□ -0.377e-7■■□□□ 11.9
NPLOC4-213ENST00000573519 PCDHB1Q9Y5F3 818 aa12.73□□□□□ -0.37
NPLOC4-213ENST00000573519 EME2A4GXA9 379 aaPredicted RBP12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 TMEM202A6NGA9 273 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 NPIPB15A6NHN6 443 aaPredicted RBP12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 MATN3O15232 486 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 CSO75390 466 aaKnown RBP12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 HEXIM1O94992 359 aaKnown RBP12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 PGLSO95336 258 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 KRT10P13645 584 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 CCNB1P14635 433 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 GM2AP17900 193 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 MX2P20592 715 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 TGM2P21980 687 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 LHCGRP22888 699 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 CCNCP24863 283 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 ETV3P41162 512 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 ARHGAP25P42331 645 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 EPHB1P54762 984 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 KIAA1024LP59773 190 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 DSC2Q02487 901 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 PTPRRQ15256 657 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 PERM1Q5SV97 790 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 KCTD16Q68DU8 428 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 PNCKQ6P2M8 343 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 HSD11B1LQ7Z5J1 315 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 TSPAN33Q86UF1 283 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 NDUFAF2Q8N183 169 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 PQLC3Q8N755 202 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 MRFAP1L1Q96HT8 127 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 COQ10AQ96MF6 247 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 MAK16Q9BXY0 300 aaKnown RBP12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 SUDS3Q9H7L9 328 aaPredicted RBP12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 CYP4F12Q9HCS2 524 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 MRPL40Q9NQ50 206 aaKnown RBP12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 PADI4Q9UM07 663 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 TFR2Q9UP52 801 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 GPR34Q9UPC5 381 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 GPSM3Q9Y4H4 160 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 HEY1Q9Y5J3 304 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 CACNA1BQ00975 2339 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 ANKRD36A6QL64 1941 aa12.72□□□□□ -0.37
NPLOC4-213ENST00000573519 TDRD6O60522 2096 aaKnown RBP12.71□□□□□ -0.37
NPLOC4-213ENST00000573519 A0A0U1RQS6 177 aa12.71□□□□□ -0.37
NPLOC4-213ENST00000573519 USP12O75317 370 aa12.71□□□□□ -0.37
NPLOC4-213ENST00000573519 KRT1P04264 644 aa12.71□□□□□ -0.37
NPLOC4-213ENST00000573519 HLA-DQB2P05538 268 aa12.71□□□□□ -0.37
NPLOC4-213ENST00000573519 PDHA1P08559 390 aa12.71□□□□□ -0.37
NPLOC4-213ENST00000573519 MAGEA1P43355 309 aa12.71□□□□□ -0.37
NPLOC4-213ENST00000573519 SLC10A2Q12908 348 aaPredicted RBP12.71□□□□□ -0.37
NPLOC4-213ENST00000573519 RTP5Q14D33 572 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms