RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 CASS4Q9NQ75 786 aa9.47□□□□□ -0.89
NPLOC4-208ENST00000572351 BFARQ9NZS9 450 aa9.47□□□□□ -0.89
NPLOC4-208ENST00000572351 HACD3Q9P035 362 aa9.47□□□□□ -0.89
NPLOC4-208ENST00000572351 ZNF711Q9Y462 761 aa9.47□□□□□ -0.89
NPLOC4-208ENST00000572351 PCDHGA2Q9Y5H1 932 aa9.47□□□□□ -0.89
NPLOC4-208ENST00000572351 MYOFQ9NZM1 2061 aa9.47□□□□□ -0.89
NPLOC4-208ENST00000572351 F5P12259 2224 aa9.47□□□□□ -0.89
NPLOC4-208ENST00000572351 NYNRINQ9P2P1 1898 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-208ENST00000572351 DOCK4Q8N1I0 1966 aa9.46□□□□□ -0.89
NPLOC4-208ENST00000572351 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 ESYT3A0FGR9 886 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 IGLON5A6NGN9 336 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 C2orf81A6NN90 581 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 H0Y858 1186 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 TM7SF2O76062 418 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 TMEM63AO94886 807 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 CLDN7O95471 211 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 CRTAMO95727 393 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 RHOXF2BP0C7M4 288 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 C6P13671 934 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 ZNF30P17039 623 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 BCKDHBP21953 392 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 LHCGRP22888 699 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 GRIA1P42261 906 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 MAGEA6P43360 314 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 PPP2CBP62714 309 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 PPP2CAP67775 309 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 RALGDSQ12967 914 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 SRSF5Q13243 272 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 MTM1Q13496 603 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 SIM2Q14190 667 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 POU6F1Q14863 301 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 PTPRRQ15256 657 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 ELF2Q15723 593 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 CNGA3Q16281 694 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 SETMARQ53H47 684 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 DNAJC21Q5F1R6 531 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 SEL1L3Q68CR1 1132 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 KIAA0895LQ68EN5 471 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 CASC4Q6P4E1 433 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 CRTC1Q6UUV9 634 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 ARMCX6Q7L4S7 300 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 LYSMD3Q7Z3D4 306 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 HORMAD1Q86X24 394 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 TMEFF1Q8IYR6 380 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 RGL4Q8IZJ4 473 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 PDIK1LQ8N165 341 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 NAT8LQ8N9F0 302 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 LRRN4CLQ8ND94 238 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 MCUQ8NE86 351 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 PPHLN1Q8NEY8 458 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 CADM4Q8NFZ8 388 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 IFT81Q8WYA0 676 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 FOXJ1Q92949 421 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 HSPA12BQ96MM6 686 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 SERPINB12Q96P63 405 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 LYSMD1Q96S90 227 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 RHOXF2Q9BQY4 288 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 C1QTNF7Q9BXJ2 289 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 MFRPQ9BY79 579 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 ARNT2Q9HBZ2 717 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 EPB41L5Q9HCM4 733 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 PKD2L2Q9NZM6 624 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 SAMD15Q9P1V8 674 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 WHRNQ9P202 907 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 MBD1Q9UIS9 605 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 FNDC3AQ9Y2H6 1198 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 PPIL1Q9Y3C6 166 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 PKP3Q9Y446 797 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 SPO11Q9Y5K1 396 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 TECTAO75443 2155 aa9.46□□□□□ -0.9
NPLOC4-208ENST00000572351 A0A0U1RQS6 177 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 PSMD11O00231 422 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 WNT9AO14904 365 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 AURKAO14965 403 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 STX7O15400 261 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 SPINT1O43278 529 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 HRO43593 1189 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 RHOBTB1O94844 696 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 MLNP12872 115 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 IVDP26440 423 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 MGAT1P26572 445 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 NPY2RP49146 381 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 DHPSP49366 369 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 PLTPP55058 493 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 ARL4CP56559 192 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 TUBB4BP68371 445 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 PDE1BQ01064 536 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 CAV1Q03135 178 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 LAMB3Q13751 1172 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 HLTFQ14527 1009 aaKnown RBP eCLIP9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 WDR45BQ5MNZ6 344 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 CERCAMQ5T4B2 595 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 DUPD1Q68J44 220 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 DENND5AQ6IQ26 1287 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 HIBCHQ6NVY1 386 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 LIPIQ6XZB0 460 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 HSD11B1LQ7Z5J1 315 aa9.45□□□□□ -0.9
NPLOC4-208ENST00000572351 TRIM69Q86WT6 500 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms