RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 AKAP7Q9P0M2 348 aaPredicted RBP15.6■□□□□ 0.09
TSR1-202ENST00000571806 LRIT1Q9P2V4 623 aa15.6■□□□□ 0.09
TSR1-202ENST00000571806 SEPT3Q9UH03 358 aa15.6■□□□□ 0.09
TSR1-202ENST00000571806 CFAP46Q8IYW2 2715 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 TMEM202A6NGA9 273 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 TRAFD1O14545 582 aaPredicted RBP15.59■□□□□ 0.09
TSR1-202ENST00000571806 PRPSAP2O60256 369 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 NOBOXO60393 691 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 SFTPCP11686 197 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 ATP1A3P13637 1013 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 ERCC2P18074 760 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 HSPA9P38646 679 aaKnown RBP15.59■□□□□ 0.09
TSR1-202ENST00000571806 SCNN1BP51168 640 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 OGDHQ02218 1023 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 HLTFQ14527 1009 aaKnown RBP eCLIP15.59■□□□□ 0.09
TSR1-202ENST00000571806 TMEM164Q5U3C3 297 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 KIAA1614Q5VZ46 1190 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 PLEKHA7Q6IQ23 1121 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 PNCKQ6P2M8 343 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 USP53Q70EK8 1073 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 SPRED1Q7Z699 444 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 ZSCAN1Q8NBB4 408 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 OR1E3Q8WZA6 343 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 SGF29Q96ES7 293 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.59■□□□□ 0.09
TSR1-202ENST00000571806 SEMA4CQ9C0C4 833 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 ZWILCHQ9H900 591 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 FGF22Q9HCT0 170 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 LMBRD1Q9NUN5 540 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 LOXL2Q9Y4K0 774 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 PCDHB11Q9Y5F2 797 aa15.59■□□□□ 0.09
TSR1-202ENST00000571806 KIF26BQ2KJY2 2108 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 COL6A6A6NMZ7 2263 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 A0A1W2PQC6 194 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 PRSS38A1L453 326 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 DFFAO00273 331 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 CASC3O15234 703 aaKnown RBP15.58■□□□□ 0.08
TSR1-202ENST00000571806 SOCS5O75159 536 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 MYCLP1P12525 358 aaPredicted RBP15.58■□□□□ 0.08
TSR1-202ENST00000571806 RGRP47804 291 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 LBRQ14739 615 aaKnown RBP15.58■□□□□ 0.08
TSR1-202ENST00000571806 ACOX1Q15067 660 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 SPECC1LQ69YQ0 1117 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 IRF2BP2Q7Z5L9 587 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 PIM3Q86V86 326 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 ARHGAP12Q8IWW6 846 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 BBS5Q8N3I7 341 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 Q8N9G6 341 aaPredicted RBP15.58■□□□□ 0.08
TSR1-202ENST00000571806 SNRNP25Q9BV90 132 aaKnown RBP15.58■□□□□ 0.08
TSR1-202ENST00000571806 GSDMCQ9BYG8 508 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 TMEM168Q9H0V1 697 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 CYP4F12Q9HCS2 524 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 MRPL40Q9NQ50 206 aaKnown RBP15.58■□□□□ 0.08
TSR1-202ENST00000571806 PHPT1Q9NRX4 125 aaPredicted RBP15.58■□□□□ 0.08
TSR1-202ENST00000571806 PISDQ9UG56 409 aa15.58■□□□□ 0.08
TSR1-202ENST00000571806 ZNF462Q96JM2 2506 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 TMEM191CA6NGB0 347 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 B4DGG1 531 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 EFSO43281 561 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 CPNE6O95741 557 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 GZMAP12544 262 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 ILF3Q12906 894 aaKnown RBP eCLIP15.57■□□□□ 0.08
TSR1-202ENST00000571806 TCEA2Q15560 299 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 STX1AQ16623 288 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 PPP6R3Q5H9R7 873 aaPredicted RBP15.57■□□□□ 0.08
TSR1-202ENST00000571806 RALGPS1Q5JS13 557 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 GPBAR1Q8TDU6 330 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 ARHGAP9Q9BRR9 750 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 SYT11Q9BT88 431 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 TEX101Q9BY14 249 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 WDR70Q9NW82 654 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 GPATCH2LQ9NWQ4 482 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 TRNAU1APQ9NX07 287 aaKnown RBP15.57■□□□□ 0.08
TSR1-202ENST00000571806 PCSK1NQ9UHG2 260 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 SCINQ9Y6U3 715 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 RNF215Q9Y6U7 377 aa15.57■□□□□ 0.08
TSR1-202ENST00000571806 ANKRD36A6QL64 1941 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 ASH1LQ9NR48 2969 aaKnown RBP15.56■□□□□ 0.08
TSR1-202ENST00000571806 PSMD11O00231 422 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 TEX33O43247 280 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 HTRA2O43464 458 aaPredicted RBP15.56■□□□□ 0.08
TSR1-202ENST00000571806 PRKCGP05129 697 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 CYP2A6P11509 494 aaPredicted RBP15.56■□□□□ 0.08
TSR1-202ENST00000571806 CCNB1P14635 433 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 TEAD1P28347 426 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 MIPP30301 263 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 GPR3P46089 330 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 B4GALNT1Q00973 533 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 KCNC4Q03721 635 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 ZNF235Q14590 738 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 CA9Q16790 459 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 MANEAQ5SRI9 462 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 SLITRK4Q8IW52 837 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 NUS1Q96E22 293 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 TRIM11Q96F44 468 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 COQ10AQ96MF6 247 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 KCTD15Q96SI1 283 aaPredicted RBP15.56■□□□□ 0.08
TSR1-202ENST00000571806 LGR4Q9BXB1 951 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 FAM117AQ9C073 453 aa15.56■□□□□ 0.08
TSR1-202ENST00000571806 CLMPQ9H6B4 373 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms