RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 ELF4Q99607 663 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-209ENST00000571558 GORASP1Q9BQQ3 440 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 RHOXF2Q9BQY4 288 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 TMEM245Q9H330 911 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 ANKZF1Q9H8Y5 726 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 UBA2Q9UBT2 640 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-209ENST00000571558 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.87□□□□□ -0.19
RPAIN-209ENST00000571558 TPX2Q9ULW0 747 aaKnown RBP13.87□□□□□ -0.19
RPAIN-209ENST00000571558 HS3ST2Q9Y278 367 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 SLCO1B1Q9Y6L6 691 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 V9GYY5 206 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-209ENST00000571558 CKAP5Q14008 2032 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 TARSL2A2RTX5 802 aaKnown RBP13.86□□□□□ -0.19
RPAIN-209ENST00000571558 CTIFO43310 598 aaKnown RBP13.86□□□□□ -0.19
RPAIN-209ENST00000571558 METTL18O95568 372 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 MMP13P45452 471 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 RPL21P46778 160 aaKnown RBP13.86□□□□□ -0.19
RPAIN-209ENST00000571558 SERPINH1P50454 418 aaKnown RBP13.86□□□□□ -0.19
RPAIN-209ENST00000571558 DRG2P55039 364 aaKnown RBP13.86□□□□□ -0.19
RPAIN-209ENST00000571558 GEMIN4P57678 1058 aaKnown RBP13.86□□□□□ -0.19
RPAIN-209ENST00000571558 ECT2LQ008S8 904 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 SULT2A1Q06520 285 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 TARDBPQ13148 414 aaKnown RBP eCLIP13.86□□□□□ -0.19
RPAIN-209ENST00000571558 ERCC6LQ2NKX8 1250 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 ALG1LQ6GMV1 187 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 RETSATQ6NUM9 610 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 C4orf22Q6V702 233 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 USP30Q70CQ3 517 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 KLHDC8BQ8IXV7 354 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 CCHCR1Q8TD31 782 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 CASKIN2Q8WXE0 1202 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 MYO19Q96H55 970 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 CNDP2Q96KP4 475 aaKnown RBP13.86□□□□□ -0.19
RPAIN-209ENST00000571558 AGAP3Q96P47 875 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 RBM22Q9NW64 420 aaKnown RBP eCLIP13.86□□□□□ -0.19
RPAIN-209ENST00000571558 GRHL1Q9NZI5 618 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 PAK5Q9P286 719 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 KLHL8Q9P2G9 620 aaPredicted RBP13.86□□□□□ -0.19
RPAIN-209ENST00000571558 SEPT3Q9UH03 358 aa13.86□□□□□ -0.19
RPAIN-209ENST00000571558 MYO18BQ8IUG5 2567 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 ATMQ13315 3056 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 MGAQ8IWI9 3026 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 K7ERQ8 282 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 SMAD6O43541 496 aaKnown RBP13.85□□□□□ -0.19
RPAIN-209ENST00000571558 ZNF821O75541 412 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-209ENST00000571558 TMCC1O94876 653 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 FSBPO95073 299 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 ASLP04424 464 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 DLDP09622 509 aaKnown RBP13.85□□□□□ -0.19
RPAIN-209ENST00000571558 SRCP12931 536 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 POLR2EP19388 210 aaKnown RBP13.85□□□□□ -0.19
RPAIN-209ENST00000571558 VPS41P49754 854 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 STK19P49842 368 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-209ENST00000571558 UCNP55089 124 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 RHDQ02161 417 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 TLE3Q04726 772 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 GPS1Q13098 491 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 NAA30Q147X3 362 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-209ENST00000571558 TRADDQ15628 312 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 FBXL19Q6PCT2 694 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 PID1Q7Z2X4 250 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 TSEN2Q8NCE0 465 aaKnown RBP13.85□□□□□ -0.19
RPAIN-209ENST00000571558 SAP25Q8TEE9 199 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 NSMCE1Q8WV22 266 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 SORCS1Q8WY21 1168 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 UBXN4Q92575 508 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 TADA1Q96BN2 335 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 MGME1Q9BQP7 344 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 ORAI3Q9BRQ5 295 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 RAB17Q9H0T7 212 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 GBA3Q9H227 469 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 GLOD4Q9HC38 313 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 GDF3Q9NR23 364 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 LHX3Q9UBR4 397 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 ASIC3Q9UHC3 531 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 ERVW-1Q9UQF0 538 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 NCKAP1Q9Y2A7 1128 aa13.85□□□□□ -0.19
RPAIN-209ENST00000571558 UTP11Q9Y3A2 253 aaKnown RBP13.85□□□□□ -0.19
RPAIN-209ENST00000571558 MUC22E2RYF6 1773 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-209ENST00000571558 A0A1W2PPC4 97 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 ESYT3A0FGR9 886 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 NFKB1P19838 968 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 CR2P20023 1033 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 PSMB4P28070 264 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 MAGEA6P43360 314 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 RGRP47804 291 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 ARRB1P49407 418 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-209ENST00000571558 ACADVLP49748 655 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 GUCY2DQ02846 1103 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 SEMA5AQ13591 1074 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 IHHQ14623 411 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 PARP6Q2NL67 630 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 HES3Q5TGS1 186 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 CCDC70Q6NSX1 233 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 ARHGEF18Q6ZSZ5 1173 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 CACUL1Q86Y37 369 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 SH2D3CQ8N5H7 860 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 ARRDC2Q8TBH0 407 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 ISG20Q96AZ6 181 aaKnown RBP13.84□□□□□ -0.19
RPAIN-209ENST00000571558 RPL10LQ96L21 214 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms