RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 OR4D9Q8NGE8 314 aa6.97□□□□□ -1.29
CHD3-213ENST00000571249 GRIN3AQ8TCU5 1115 aa6.97□□□□□ -1.29
CHD3-213ENST00000571249 ASB12Q8WXK4 309 aa6.97□□□□□ -1.29
CHD3-213ENST00000571249 AZIN2Q96A70 460 aa6.97□□□□□ -1.29
CHD3-213ENST00000571249 CALML4Q96GE6 196 aa6.97□□□□□ -1.29
CHD3-213ENST00000571249 C18orf12Q96KH6 178 aa6.97□□□□□ -1.29
CHD3-213ENST00000571249 USP28Q96RU2 1077 aa6.97□□□□□ -1.29
CHD3-213ENST00000571249 FGFBP2Q9BYJ0 223 aa6.97□□□□□ -1.29
CHD3-213ENST00000571249 ULBP1Q9BZM6 244 aa6.97□□□□□ -1.29
CHD3-213ENST00000571249 LIME1Q9H400 295 aa6.97□□□□□ -1.29
CHD3-213ENST00000571249 DPEP2Q9H4A9 486 aa6.97□□□□□ -1.29
CHD3-213ENST00000571249 TSR3Q9UJK0 312 aaKnown RBP6.97□□□□□ -1.29
CHD3-213ENST00000571249 RYR3Q15413 4870 aa6.97□□□□□ -1.29
CHD3-213ENST00000571249 FAM237AA0A1B0GTK4 181 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 SYCE3A1L190 88 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 RHPN2P1A8MT19 583 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 INAFM1C9JVW0 142 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 SPTLC2O15270 562 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 P4HA1P13674 534 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 CASP14P31944 242 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 PLK1P53350 603 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 TBX4P57082 545 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 RUNX1T1Q06455 604 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 SLC12A1Q13621 1099 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 IL10RAQ13651 578 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 MAP7Q14244 749 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 SNRNP35Q16560 246 aaKnown RBP6.96□□□□□ -1.3
CHD3-213ENST00000571249 RAB41Q5JT25 222 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 SNAP47Q5SQN1 464 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 SPECC1LQ69YQ0 1117 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 C6orf15Q6UXA7 325 aaPredicted RBP6.96□□□□□ -1.3
CHD3-213ENST00000571249 LYSMD3Q7Z3D4 306 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 LGI2Q8N0V4 545 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 SH2D3CQ8N5H7 860 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 OR2A12Q8NGT7 310 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 NINJ1Q92982 152 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 PPP1R16AQ96I34 528 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 PPP1R9BQ96SB3 815 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 SPOCK3Q9BQ16 436 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 ZPBPQ9BS86 351 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 UBXN6Q9BZV1 441 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 ILKAPQ9H0C8 392 aaPredicted RBP6.96□□□□□ -1.3
CHD3-213ENST00000571249 RBSNQ9H1K0 784 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 ACTL8Q9H568 366 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 AKIRIN1Q9H9L7 192 aaPredicted RBP6.96□□□□□ -1.3
CHD3-213ENST00000571249 ETNK1Q9HBU6 452 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 KIAA1586Q9HCI6 787 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 MBNL1Q9NR56 388 aaKnown RBP6.96□□□□□ -1.3
CHD3-213ENST00000571249 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.96□□□□□ -1.3
CHD3-213ENST00000571249 AGPAT4Q9NRZ5 378 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 FGF21Q9NSA1 209 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 FAM13BQ9NYF5 915 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 TNFRSF10DQ9UBN6 386 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 FAM8A1Q9UBU6 413 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 USP25Q9UHP3 1055 aa6.96□□□□□ -1.3
CHD3-213ENST00000571249 YJEFN3A6XGL0 299 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 E7ENQ6 273 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 K7ERQ8 282 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 NEMP1O14524 444 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 TOR1BO14657 336 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 CLIC2O15247 247 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 ZW10O43264 779 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 TSPAN6O43657 245 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 LEFTY1O75610 366 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 MOCS2O96007 188 aaPredicted RBP6.95□□□□□ -1.3
CHD3-213ENST00000571249 MT-CO1P00395 513 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 TNFP01375 233 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 S100BP04271 92 aaPredicted RBP6.95□□□□□ -1.3
CHD3-213ENST00000571249 GAP43P17677 238 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 UBA7P41226 1012 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 PTGIRP43119 386 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 KCNK10P57789 538 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 SRP54P61011 504 aaKnown RBP6.95□□□□□ -1.3
CHD3-213ENST00000571249 CYP24A1Q07973 514 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 NNTQ13423 1086 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 DNASE1L3Q13609 305 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 ZNF235Q14590 738 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 SLC39A14Q15043 492 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 LLGL1Q15334 1064 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 FAM26FQ5R3K3 315 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 HGSNATQ68CP4 663 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 PLEKHA7Q6IQ23 1121 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 ZNF765Q7L2R6 523 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 ZSCAN30Q86W11 494 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 CIR1Q86X95 450 aaPredicted RBP6.95□□□□□ -1.3
CHD3-213ENST00000571249 HPS6Q86YV9 775 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 LINC00301Q8NCQ3 95 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 RASSF8Q8NHQ8 419 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 CCL4L1Q8NHW4 92 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 GRHL3Q8TE85 626 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 LARP4BQ92615 738 aaKnown RBP6.95□□□□□ -1.3
CHD3-213ENST00000571249 MTFMTQ96DP5 389 aaKnown RBP6.95□□□□□ -1.3
CHD3-213ENST00000571249 SCARF2Q96GP6 870 aaPredicted RBP6.95□□□□□ -1.3
CHD3-213ENST00000571249 PDLIM2Q96JY6 352 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 CCDC114Q96M63 670 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 RBM15Q96T37 977 aaKnown RBP eCLIP6.95□□□□□ -1.3
CHD3-213ENST00000571249 SMAD5Q99717 465 aaKnown RBP6.95□□□□□ -1.3
CHD3-213ENST00000571249 NT5C1AQ9BXI3 368 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 ULBP3Q9BZM4 244 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 TSPY26PQ9H489 355 aa6.95□□□□□ -1.3
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