RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 A0A0U1RQS6 177 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 TMEM110-MUSTN1A8MSY1 372 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 CACNB4O00305 520 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-220ENST00000569827 TOR1BO14657 336 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 NVLO15381 856 aaKnown RBP12.11□□□□□ -0.47
CAPN3-220ENST00000569827 ATMINO43313 823 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-220ENST00000569827 ELFN1P0C7U0 828 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 ALDH4A1P30038 563 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 PAPOLAP51003 745 aaKnown RBP12.11□□□□□ -0.47
CAPN3-220ENST00000569827 YBEYP58557 167 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-220ENST00000569827 KIAA1024LP59773 190 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 UBE2HP62256 183 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 B4GALNT1Q00973 533 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 ACOX1Q15067 660 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 CLEC16AQ2KHT3 1053 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 PARP15Q460N3 678 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 NKAIN2Q5VXU1 208 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 DNAJC24Q6P3W2 148 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 LIPIQ6XZB0 460 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 ZNF574Q6ZN55 896 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-220ENST00000569827 ATG14Q6ZNE5 492 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 SRLQ86TD4 932 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 ZNF761Q86XN6 746 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-220ENST00000569827 ZNF677Q86XU0 584 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 C3orf20Q8ND61 904 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 CASKIN2Q8WXE0 1202 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 CLSTN2Q9H4D0 955 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 LRRC19Q9H756 370 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 CARS2Q9HA77 564 aaKnown RBP12.11□□□□□ -0.47
CAPN3-220ENST00000569827 TMEM51Q9NW97 253 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 PLEKHM1Q9Y4G2 1056 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 ST14Q9Y5Y6 855 aa12.11□□□□□ -0.47
CAPN3-220ENST00000569827 NBPF19A0A087WUL8 3843 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 TCRBV5S1A1TA0A578 114 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 PRSS38A1L453 326 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 GOLGA6CA6NDK9 693 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 GOLGA6BA6NDN3 693 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 TMX2-CTNND1H3BSU7 103 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 DFFAO00273 331 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 SUV39H1O43463 412 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 PRAMEF11O60813 436 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 FUCA1P04066 466 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 GOLGA6DP0CG33 693 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 GNPDA1P46926 289 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 POLD2P49005 469 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 TLE1Q04724 770 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 KRT31Q15323 416 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 SKIDA1Q1XH10 827 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 OGFOD3Q6PK18 319 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 DOK6Q6PKX4 331 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 SLC30A9Q6PML9 568 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 MON1BQ7L1V2 547 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 DTX1Q86Y01 620 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 NRROSQ86YC3 692 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 UMODL1-AS1Q8N2C9 162 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 NPWQ8N729 165 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 ATL2Q8NHH9 583 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 ZDHHC1Q8WTX9 485 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 CCDC74BQ96LY2 380 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 CMKLR1Q99788 373 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 WDR26Q9H7D7 661 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 CATSPERBQ9H7T0 1116 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 GOLGA6AQ9NYA3 693 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 TMEM9Q9P0T7 183 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 SEPT10Q9P0V9 454 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 B4GALT6Q9UBX8 382 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 APPL1Q9UKG1 709 aa12.1□□□□□ -0.47
CAPN3-220ENST00000569827 ICE1Q9Y2F5 2266 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 IGHV5-10-1A0A0J9YXX1 117 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 SIGLEC16A6NMB1 481 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 WASH4PA8MWX3 477 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 PALMO75781 387 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 ECEL1O95672 775 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 ITGB2P05107 769 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 FGF3P11487 239 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-220ENST00000569827 TNFAIP3P21580 790 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 SERPINA4P29622 427 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 CSF2RBP32927 897 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 ZNF143P52747 638 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-220ENST00000569827 AGERQ15109 404 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 CNGA3Q16281 694 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 BRAT1Q6PJG6 821 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 TRIM72Q6ZMU5 477 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 HEATR4Q86WZ0 1026 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 PHF13Q86YI8 300 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-220ENST00000569827 ARHGAP12Q8IWW6 846 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 OR6C4Q8NGE1 309 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 FNIP1Q8TF40 1166 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 PDCD6IPQ8WUM4 868 aaKnown RBP12.09□□□□□ -0.47
CAPN3-220ENST00000569827 PCMTD1Q96MG8 357 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-220ENST00000569827 ZNF641Q96N77 438 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-220ENST00000569827 SMIM14Q96QK8 99 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 PEBP4Q96S96 227 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 KCTD15Q96SI1 283 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-220ENST00000569827 CINPQ9BW66 212 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-220ENST00000569827 DHX35Q9H5Z1 703 aaKnown RBP12.09□□□□□ -0.47
CAPN3-220ENST00000569827 RETREG1Q9H6L5 497 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 ATP13A3Q9H7F0 1226 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 SP110Q9HB58 689 aa12.09□□□□□ -0.47
CAPN3-220ENST00000569827 TAS2R14Q9NYV8 317 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms