RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 PDHA1P08559 390 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 C7P10643 843 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 DRD3P35462 400 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 MPLP40238 635 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 CDK16Q00536 496 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 GALNT3Q14435 633 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 SLC1A5Q15758 541 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 KDELC1Q6UW63 502 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 MMGT1Q8N4V1 131 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 RLN3Q8WXF3 142 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 TADA1Q96BN2 335 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 TOE1Q96GM8 510 aaKnown RBP16.1■□□□□ 0.17
USB1-215ENST00000569252 MRGPRX2Q96LB1 330 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 PCDH12Q9NPG4 1184 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 FAM208BQ5VWN6 2430 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 TSPAN11A1L157 253 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 SMAPO00193 183 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 PLK4O00444 970 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 RAD51CO43502 376 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 AP1G1O43747 822 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 FZD6O60353 706 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 KCNK5O95279 499 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 SEMA4FO95754 770 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 IGLV3-19P01714 112 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 FGF1P05230 155 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 ZNF806P0C7X5 589 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 CTPS1P17812 591 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 METAP1P53582 386 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 CALCOCO2Q13137 446 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 SPARCL1Q14515 664 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 SYCP2LQ5T4T6 812 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 PIP5KL1Q5T9C9 394 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 NEK5Q6P3R8 708 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 PPIL6Q8IXY8 311 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 OR2T34Q8NGX1 318 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 PIH1D2Q8WWB5 315 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 SCRN2Q96FV2 425 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 ERP44Q9BS26 406 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 TRIM31Q9BZY9 425 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 PREBQ9HCU5 417 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 EIF2B3Q9NR50 452 aaKnown RBP16.09■□□□□ 0.17
USB1-215ENST00000569252 NEU2Q9Y3R4 380 aa16.09■□□□□ 0.17
USB1-215ENST00000569252 CKAP5Q14008 2032 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 A0A0J9YYE9 177 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 PATE3B3GLJ2 98 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 RIOK3O14730 519 aaKnown RBP16.08■□□□□ 0.16
USB1-215ENST00000569252 PLRG1O43660 514 aaKnown RBP16.08■□□□□ 0.16
USB1-215ENST00000569252 TRBC1P01850 177 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 ITIH2P19823 946 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 TPSB2P20231 275 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 HNF1BP35680 557 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 ABL2P42684 1182 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 ADPRHP54922 357 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 RPS21P63220 83 aaKnown RBP16.08■□□□□ 0.16
USB1-215ENST00000569252 RPL6Q02878 288 aaKnown RBP16.08■□□□□ 0.16
USB1-215ENST00000569252 CDH17Q12864 832 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 SGCGQ13326 291 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 LAMB3Q13751 1172 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 TPSAB1Q15661 275 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 MAP7D1Q3KQU3 841 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 PLK5Q496M5 336 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 SIRPB2Q5JXA9 342 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 PLA2G2CQ5R387 149 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 AGBL4Q5VU57 503 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 RANBP10Q6VN20 620 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 SPOCK2Q92563 424 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 SNF8Q96H20 258 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 NSMCE3Q96MG7 304 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 APOL2Q9BQE5 337 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 GPR174Q9BXC1 333 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 GPR63Q9BZJ6 419 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 DUSP15Q9H1R2 295 aaPredicted RBP16.08■□□□□ 0.16
USB1-215ENST00000569252 L2HGDHQ9H9P8 463 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 MAGEE1Q9HCI5 957 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 WSB2Q9NYS7 404 aaPredicted RBP16.08■□□□□ 0.16
USB1-215ENST00000569252 HACD3Q9P035 362 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 SERGEFQ9UGK8 458 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 ANAPC5Q9UJX4 755 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 PPIL1Q9Y3C6 166 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 FADS3Q9Y5Q0 445 aa16.08■□□□□ 0.16
USB1-215ENST00000569252 IGHV1OR15-9A0A0B4J2B8 117 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 C4orf47A7E2U8 309 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 A8MX80 341 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 DNALI1O14645 258 aaPredicted RBP16.07■□□□□ 0.16
USB1-215ENST00000569252 LZTS3O60299 673 aaPredicted RBP16.07■□□□□ 0.16
USB1-215ENST00000569252 USP12O75317 370 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 RHOBTB1O94844 696 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 SUN1O94901 812 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 PRLP01236 227 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 ELFN1P0C7U0 828 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 VIPR1P32241 457 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 ACSL1P33121 698 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 LIMK1P53667 647 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 CREB5Q02930 508 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 FOXC1Q12948 553 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 QPCTQ16769 361 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 LRRC73Q5JTD7 316 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 IZUMO3Q5VZ72 239 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 KCTD11Q693B1 232 aa16.07■□□□□ 0.16
USB1-215ENST00000569252 KIAA1161Q6NSJ0 714 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms