RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 CLDN1O95832 211 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 CALCAP01258 141 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 MT-ND3P03897 115 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 RHOQP17081 205 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 COL8A1P27658 744 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 KRT9P35527 623 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 DLSTP36957 453 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 SCNN1AP37088 669 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 RNASE9P60153 205 aaKnown RBP8.69□□□□□ -1.02
SMG1-216ENST00000569122 RHOAP61586 193 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 POLR2LP62875 67 aaKnown RBP8.69□□□□□ -1.02
SMG1-216ENST00000569122 STIM1Q13586 685 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 ERV3-1Q14264 604 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 INPP5JQ15735 1006 aaPredicted RBP8.69□□□□□ -1.02
SMG1-216ENST00000569122 CCDC40Q4G0X9 1142 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 LRRC73Q5JTD7 316 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 NKAIN2Q5VXU1 208 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 CYB5D1Q6P9G0 228 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 FOXR2Q6PJQ5 311 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 C6orf15Q6UXA7 325 aaPredicted RBP8.69□□□□□ -1.02
SMG1-216ENST00000569122 KRBA2Q6ZNG9 492 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 FAM183BPQ6ZVS7 135 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 ARHGAP22Q7Z5H3 698 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 ZNF354CQ86Y25 554 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 DNAAF5Q86Y56 855 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 LMO3Q8TAP4 145 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 THAP4Q8WY91 577 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 NT5C3BQ969T7 300 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 SH3KBP1Q96B97 665 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 SLC38A3Q99624 504 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 EPB41L1Q9H4G0 881 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 SUV39H2Q9H5I1 410 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 CARS2Q9HA77 564 aaKnown RBP8.69□□□□□ -1.02
SMG1-216ENST00000569122 UBE2TQ9NPD8 197 aaPredicted RBP8.69□□□□□ -1.02
SMG1-216ENST00000569122 SLAMF7Q9NQ25 335 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 MRPL40Q9NQ50 206 aaKnown RBP8.69□□□□□ -1.02
SMG1-216ENST00000569122 PHPT1Q9NRX4 125 aaPredicted RBP8.69□□□□□ -1.02
SMG1-216ENST00000569122 ZNF212Q9UDV6 495 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 PCDHGC3Q9UN70 934 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 HPSEQ9Y251 543 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 ATP8A1Q9Y2Q0 1164 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 ZNF451Q9Y4E5 1061 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 OAS3Q9Y6K5 1087 aaKnown RBP8.69□□□□□ -1.02
SMG1-216ENST00000569122 CELSR2Q9HCU4 2923 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 ZFC3H1O60293 1989 aaKnown RBP8.68□□□□□ -1.02
SMG1-216ENST00000569122 DOCK9Q9BZ29 2069 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 PIPSLA2A3N6 862 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 K7EM74 188 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 DPM1O60762 260 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 KATNA1O75449 491 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 RECQL5O94762 991 aaPredicted RBP8.68□□□□□ -1.02
SMG1-216ENST00000569122 TMCC1O94876 653 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 DLGAP3O95886 979 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 LDLRP01130 860 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 ELFN1P0C7U0 828 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 MYCLP1P12525 358 aaPredicted RBP8.68□□□□□ -1.02
SMG1-216ENST00000569122 ITIH2P19823 946 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 BMP6P22004 513 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 MPSTP25325 297 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 NFKBIAP25963 317 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 ACVRL1P37023 503 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 PPP1R2P41236 205 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 FASLGP48023 281 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 NRG1Q02297 640 aaPredicted RBP8.68□□□□□ -1.02
SMG1-216ENST00000569122 PTK2Q05397 1052 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 SEMA5AQ13591 1074 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 ATXN7L2Q5T6C5 722 aaPredicted RBP8.68□□□□□ -1.02
SMG1-216ENST00000569122 ANKRD40Q6AI12 368 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 RWDD4Q6NW29 188 aaKnown RBP8.68□□□□□ -1.02
SMG1-216ENST00000569122 PNCKQ6P2M8 343 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 SLC47A2Q86VL8 602 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 CCL4L1Q8NHW4 92 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 STAMBPL1Q96FJ0 436 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 KREMEN1Q96MU8 473 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 TUBGCP5Q96RT8 1024 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 CTRCQ99895 268 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 SLC25A23Q9BV35 468 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 ULBP3Q9BZM4 244 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 TWSG1Q9GZX9 223 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 ZNF768Q9H5H4 540 aaKnown RBP8.68□□□□□ -1.02
SMG1-216ENST00000569122 TMEM248Q9NWD8 314 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 TMEM63CQ9P1W3 806 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 OR12D3Q9UGF7 316 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 PCDHGA6Q9Y5G7 932 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 SNX10Q9Y5X0 201 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 LRBAP50851 2863 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 UNC13CQ8NB66 2214 aa8.68□□□□□ -1.02
SMG1-216ENST00000569122 TSPAN11A1L157 253 aa8.67□□□□□ -1.02
SMG1-216ENST00000569122 HEATR9A2RTY3 570 aa8.67□□□□□ -1.02
SMG1-216ENST00000569122 CDC14CA4D256 554 aa8.67□□□□□ -1.02
SMG1-216ENST00000569122 TCP11X1B4DZS4 312 aa8.67□□□□□ -1.02
SMG1-216ENST00000569122 C21orf140B9A014 251 aa8.67□□□□□ -1.02
SMG1-216ENST00000569122 PSMA7O14818 248 aa8.67□□□□□ -1.02
SMG1-216ENST00000569122 PPM1DO15297 605 aa8.67□□□□□ -1.02
SMG1-216ENST00000569122 CREG1O75629 220 aa8.67□□□□□ -1.02
SMG1-216ENST00000569122 SORBS2O94875 1100 aaKnown RBP8.67□□□□□ -1.02
SMG1-216ENST00000569122 GNA14O95837 355 aa8.67□□□□□ -1.02
SMG1-216ENST00000569122 ZSCAN22P10073 491 aaPredicted RBP8.67□□□□□ -1.02
SMG1-216ENST00000569122 CASP14P31944 242 aa8.67□□□□□ -1.02
SMG1-216ENST00000569122 MMP12P39900 470 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms