RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ADCY8P40145 1251 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 NBL1P41271 181 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 CNGA3Q16281 694 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 LPAL2Q16609 132 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 CDKN3Q16667 212 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 LYSMD4Q5XG99 296 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 LRRC66Q68CR7 880 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 DENND5AQ6IQ26 1287 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 DNASE2BQ8WZ79 361 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 SNX19Q92543 992 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 KLK6Q92876 244 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 C1QTNF2Q9BXJ5 285 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 SEMA4AQ9H3S1 761 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 EBF2Q9HAK2 575 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 SPO11Q9Y5K1 396 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 A0A0U1RQS6 177 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 C1orf232A0A0U1RR37 186 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 CTAGE15A4D2H0 777 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 FAM187AA6NFU0 413 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 PSMD11O00231 422 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 LZTS3O60299 673 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-224ENST00000568877 CLDN7O95471 211 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 PAK4O96013 591 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-224ENST00000568877 CTAGE8P0CG41 777 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 TPSB2P20231 275 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 CD27P26842 260 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 MAOBP27338 520 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 NUDT1P36639 197 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 MAGEA6P43360 314 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 TERF1P54274 439 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 CDK16Q00536 496 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 PTSQ03393 145 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 SGCGQ13326 291 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 FGL2Q14314 439 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 KCNJ11Q14654 390 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 TPSAB1Q15661 275 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 SETMARQ53H47 684 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-224ENST00000568877 WDR45BQ5MNZ6 344 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 CTAGE6Q86UF2 777 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 CTAGE4Q8IX94 777 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 RGL4Q8IZJ4 473 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 CBARPQ8N350 705 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-224ENST00000568877 CEP112Q8N8E3 955 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 ASB12Q8WXK4 309 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 CPT1BQ92523 772 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 LOXL4Q96JB6 756 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 TRIM51Q9BSJ1 452 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 TRABDQ9H4I3 376 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 HACD3Q9P035 362 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 SMG5Q9UPR3 1016 aaKnown RBP16.77■□□□□ 0.28
COMMD4-224ENST00000568877 SHOC2Q9UQ13 582 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 ZNF711Q9Y462 761 aa16.77■□□□□ 0.28
COMMD4-224ENST00000568877 A0A1W2PPC4 97 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 TCRBV7S3A2A0A539 114 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 SLC31A1O15431 190 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 RAD51CO43502 376 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 ITPKAP23677 461 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 GRIA1P42261 906 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 STC1P52823 247 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 MRPS25P82663 173 aaKnown RBP16.76■□□□□ 0.27
COMMD4-224ENST00000568877 CREB5Q02930 508 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 CDH17Q12864 832 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 MSLNQ13421 630 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-224ENST00000568877 ACOX1Q15067 660 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 DENND2CQ68D51 928 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 PPP1R21Q6ZMI0 780 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 LYSMD3Q7Z3D4 306 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 HSD11B1LQ7Z5J1 315 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 DNAAF3Q8N9W5 541 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 OR52K1Q8NGK4 314 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 BLOC1S5Q8TDH9 187 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 COQ10AQ96MF6 247 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 ORAI3Q9BRQ5 295 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 GPR63Q9BZJ6 419 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 ZFYVE1Q9HBF4 777 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 CASS4Q9NQ75 786 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 EIF2B4Q9UI10 523 aaKnown RBP16.76■□□□□ 0.27
COMMD4-224ENST00000568877 DMTF1Q9Y222 760 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 COQ6Q9Y2Z9 468 aa16.76■□□□□ 0.27
COMMD4-224ENST00000568877 NUMA1Q14980 2115 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 DNALI1O14645 258 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-224ENST00000568877 AURKAO14965 403 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 RECQL5O94762 991 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-224ENST00000568877 C1SP09871 688 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 TPH1P17752 444 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 GM2AP17900 193 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 HNRNPA2B1P22626 353 aaKnown RBP16.75■□□□□ 0.27
COMMD4-224ENST00000568877 IVDP26440 423 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 AGERQ15109 404 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 ANKRD22Q5VYY1 191 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 LAIR1Q6GTX8 287 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 TMC3Q7Z5M5 1100 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 PCGF5Q86SE9 256 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 PPIL6Q8IXY8 311 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 RAVER1Q8IY67 606 aaKnown RBP16.75■□□□□ 0.27
COMMD4-224ENST00000568877 MMGT1Q8N4V1 131 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 SUMF1Q8NBK3 374 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 EID2BQ96D98 161 aa16.75■□□□□ 0.27
COMMD4-224ENST00000568877 LENG8Q96PV6 779 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-224ENST00000568877 CARD6Q9BX69 1037 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms