RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 LAMA5O15230 3695 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 TRABD2BA6NFA1 517 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 PSMD11O00231 422 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 TAF4O00268 1085 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 KRT37O76014 449 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 FECHP22830 423 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 HNF1BP35680 557 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 MAGEA1P43355 309 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 DUSP3P51452 185 aaPredicted RBP29.46■■■□□ 2.31
RAB40C-211ENST00000568586 HK3P52790 923 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 KIAA1024LP59773 190 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 ALG11Q2TAA5 492 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 PRRT3Q5FWE3 981 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 HES3Q5TGS1 186 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 PROSER1Q86XN7 944 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 RHOT1Q8IXI2 618 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 SDR16C5Q8N3Y7 309 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 ATL2Q8NHH9 583 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 TPCN2Q8NHX9 752 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 ARRDC2Q8TBH0 407 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 PDCD6IPQ8WUM4 868 aaKnown RBP29.46■■■□□ 2.31
RAB40C-211ENST00000568586 BOCQ9BWV1 1114 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 CLPBQ9H078 707 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 HAUS2Q9NVX0 235 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 ACACAQ13085 2346 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 ZFHX4Q86UP3 3567 aa29.46■■■□□ 2.31
RAB40C-211ENST00000568586 PCCBP05166 539 aa29.45■■■□□ 2.31
RAB40C-211ENST00000568586 CYP2A6P11509 494 aaPredicted RBP29.45■■■□□ 2.31
RAB40C-211ENST00000568586 JUPP14923 745 aa29.45■■■□□ 2.31
RAB40C-211ENST00000568586 INSM1Q01101 510 aaPredicted RBP29.45■■■□□ 2.31
RAB40C-211ENST00000568586 PPIDQ08752 370 aaKnown RBP29.45■■■□□ 2.31
RAB40C-211ENST00000568586 TAZQ16635 292 aa29.45■■■□□ 2.31
RAB40C-211ENST00000568586 ZFYVE27Q5T4F4 411 aa29.45■■■□□ 2.31
RAB40C-211ENST00000568586 FAXCQ5TGI0 409 aa29.45■■■□□ 2.31
RAB40C-211ENST00000568586 CCDC13Q8IYE1 715 aa29.45■■■□□ 2.31
RAB40C-211ENST00000568586 FSTL5Q8N475 847 aaPredicted RBP29.45■■■□□ 2.31
RAB40C-211ENST00000568586 FUBP1Q96AE4 644 aaKnown RBP29.45■■■□□ 2.31
RAB40C-211ENST00000568586 PANX2Q96RD6 677 aa29.45■■■□□ 2.31
RAB40C-211ENST00000568586 IL12RB2Q99665 862 aa29.45■■■□□ 2.31
RAB40C-211ENST00000568586 CCDC86Q9H6F5 360 aaKnown RBP29.45■■■□□ 2.31
RAB40C-211ENST00000568586 EVA1BQ9NVM1 165 aa29.45■■■□□ 2.31
RAB40C-211ENST00000568586 DDX56Q9NY93 547 aaKnown RBP29.45■■■□□ 2.31
RAB40C-211ENST00000568586 DGKBQ9Y6T7 804 aa29.45■■■□□ 2.31
RAB40C-211ENST00000568586 SRRM3A6NNA2 597 aaPredicted RBP29.44■■■□□ 2.3
RAB40C-211ENST00000568586 A8MX80 341 aa29.44■■■□□ 2.3
RAB40C-211ENST00000568586 PDHA1P08559 390 aa29.44■■■□□ 2.3
RAB40C-211ENST00000568586 TSHRP16473 764 aa29.44■■■□□ 2.3
RAB40C-211ENST00000568586 COMTP21964 271 aa29.44■■■□□ 2.3
RAB40C-211ENST00000568586 LHCGRP22888 699 aa29.44■■■□□ 2.3
RAB40C-211ENST00000568586 LVRNQ6Q4G3 990 aa29.44■■■□□ 2.3
RAB40C-211ENST00000568586 DCBLD1Q8N8Z6 715 aa29.44■■■□□ 2.3
RAB40C-211ENST00000568586 WDR92Q96MX6 357 aa29.44■■■□□ 2.3
RAB40C-211ENST00000568586 NPIPB15A6NHN6 443 aaPredicted RBP29.43■■■□□ 2.3
RAB40C-211ENST00000568586 TNFRSF10CO14798 259 aa29.43■■■□□ 2.3
RAB40C-211ENST00000568586 RASGRP1O95267 797 aa29.43■■■□□ 2.3
RAB40C-211ENST00000568586 ZFXP17010 805 aaPredicted RBP29.43■■■□□ 2.3
RAB40C-211ENST00000568586 CLDN6P56747 220 aa29.43■■■□□ 2.3
RAB40C-211ENST00000568586 SRP54P61011 504 aaKnown RBP29.43■■■□□ 2.3
RAB40C-211ENST00000568586 IFI35P80217 286 aaPredicted RBP29.43■■■□□ 2.3
RAB40C-211ENST00000568586 DSC2Q02487 901 aa29.43■■■□□ 2.3
RAB40C-211ENST00000568586 ITKQ08881 620 aa29.43■■■□□ 2.3
RAB40C-211ENST00000568586 ACOX1Q15067 660 aa29.43■■■□□ 2.3
RAB40C-211ENST00000568586 DEFB133Q30KQ1 61 aa29.43■■■□□ 2.3
RAB40C-211ENST00000568586 PNCKQ6P2M8 343 aa29.43■■■□□ 2.3
RAB40C-211ENST00000568586 ENPP7Q6UWV6 458 aa29.43■■■□□ 2.3
RAB40C-211ENST00000568586 USP45Q70EL2 814 aa29.43■■■□□ 2.3
RAB40C-211ENST00000568586 TSACCQ96A04 125 aaPredicted RBP29.43■■■□□ 2.3
RAB40C-211ENST00000568586 DTD2Q96FN9 168 aa29.43■■■□□ 2.3
RAB40C-211ENST00000568586 ZNF830Q96NB3 372 aaPredicted RBP29.43■■■□□ 2.3
RAB40C-211ENST00000568586 OLFM3Q96PB7 478 aa29.43■■■□□ 2.3
RAB40C-211ENST00000568586 LGMNQ99538 433 aa29.43■■■□□ 2.3
RAB40C-211ENST00000568586 PCDHA13Q9Y5I0 950 aa29.43■■■□□ 2.3
RAB40C-211ENST00000568586 A0A0A6YYK5 440 aaPredicted RBP29.42■■■□□ 2.3
RAB40C-211ENST00000568586 YY2O15391 372 aa29.42■■■□□ 2.3
RAB40C-211ENST00000568586 HLA-DQB2P05538 268 aa29.42■■■□□ 2.3
RAB40C-211ENST00000568586 TEAD1P28347 426 aa29.42■■■□□ 2.3
RAB40C-211ENST00000568586 RPL26P61254 145 aaKnown RBP29.42■■■□□ 2.3
RAB40C-211ENST00000568586 NIPAL4Q0D2K0 466 aa29.42■■■□□ 2.3
RAB40C-211ENST00000568586 TARDBPQ13148 414 aaKnown RBP eCLIP29.42■■■□□ 2.3
RAB40C-211ENST00000568586 C1orf61Q13536 156 aa29.42■■■□□ 2.3
RAB40C-211ENST00000568586 C6orf132Q5T0Z8 1188 aa29.42■■■□□ 2.3
RAB40C-211ENST00000568586 CDCP2Q5VXM1 449 aa29.42■■■□□ 2.3
RAB40C-211ENST00000568586 HID1Q8IV36 788 aa29.42■■■□□ 2.3
RAB40C-211ENST00000568586 PELI3Q8N2H9 469 aa29.42■■■□□ 2.3
RAB40C-211ENST00000568586 CCNYQ8ND76 341 aa29.42■■■□□ 2.3
RAB40C-211ENST00000568586 ANP32EQ9BTT0 268 aa29.42■■■□□ 2.3
RAB40C-211ENST00000568586 TDRD1Q9BXT4 1180 aaKnown RBP29.42■■■□□ 2.3
RAB40C-211ENST00000568586 RPL26L1Q9UNX3 145 aaKnown RBP29.42■■■□□ 2.3
RAB40C-211ENST00000568586 ALG6Q9Y672 507 aa29.42■■■□□ 2.3
RAB40C-211ENST00000568586 EME2A4GXA9 379 aaPredicted RBP29.41■■■□□ 2.3
RAB40C-211ENST00000568586 CACNB4O00305 520 aaPredicted RBP29.41■■■□□ 2.3
RAB40C-211ENST00000568586 APOL1O14791 398 aa29.41■■■□□ 2.3
RAB40C-211ENST00000568586 PSTPIP1O43586 416 aa29.41■■■□□ 2.3
RAB40C-211ENST00000568586 OPA1O60313 960 aa29.41■■■□□ 2.3
RAB40C-211ENST00000568586 PRLP01236 227 aa29.41■■■□□ 2.3
RAB40C-211ENST00000568586 KRT1P04264 644 aa29.41■■■□□ 2.3
RAB40C-211ENST00000568586 MYF5P13349 255 aa29.41■■■□□ 2.3
RAB40C-211ENST00000568586 KRT10P13645 584 aa29.41■■■□□ 2.3
RAB40C-211ENST00000568586 KELP23276 732 aa29.41■■■□□ 2.3
RAB40C-211ENST00000568586 ELOCQ15369 112 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms