RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 ANKRD52Q8NB46 1076 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 KDM1BQ8NB78 822 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 OR6J1Q8NGC5 347 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 SNX19Q92543 992 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 TP53INP1Q96A56 240 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 CRELD1Q96HD1 420 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 TXNDC15Q96J42 360 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 BCL7BQ9BQE9 202 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 ZNF670Q9BS34 389 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 CALN1Q9BXU9 219 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 NIF3L1Q9GZT8 377 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 PARVBQ9HBI1 364 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 SPAG4Q9NPE6 437 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 SACM1LQ9NTJ5 587 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 C20orf96Q9NUD7 363 aaPredicted RBP5.48□□□□□ -1.53
LINC01541-202ENST00000568095 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.48□□□□□ -1.53
LINC01541-202ENST00000568095 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.48□□□□□ -1.53
LINC01541-202ENST00000568095 ABCD2Q9UBJ2 740 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 PCSK1NQ9UHG2 260 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 SPO11Q9Y5K1 396 aa5.48□□□□□ -1.53
LINC01541-202ENST00000568095 CROCCQ5TZA2 2017 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 PTPRSQ13332 1948 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 ALPK3Q96L96 1907 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 KCNU1A8MYU2 1149 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 DUSP11O75319 330 aaKnown RBP5.47□□□□□ -1.53
LINC01541-202ENST00000568095 HMGCRP04035 888 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 TYK2P29597 1187 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 RCVRNP35243 200 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 GARSP41250 739 aaKnown RBP5.47□□□□□ -1.53
LINC01541-202ENST00000568095 ACOT2P49753 483 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 VEGFBP49765 207 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 STX5Q13190 355 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 NME3Q13232 169 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 MXD4Q14582 209 aaPredicted RBP5.47□□□□□ -1.53
LINC01541-202ENST00000568095 DEFB115Q30KQ5 88 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 INAVAQ3KP66 663 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 ARL13AQ5H913 290 aaPredicted RBP5.47□□□□□ -1.53
LINC01541-202ENST00000568095 SPANXN3Q5MJ09 141 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 SAMD4BQ5PRF9 694 aaKnown RBP5.47□□□□□ -1.53
LINC01541-202ENST00000568095 TMEM198Q66K66 360 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 TRAF7Q6Q0C0 670 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 VASH1Q7L8A9 365 aaPredicted RBP5.47□□□□□ -1.53
LINC01541-202ENST00000568095 LACC1Q8IV20 430 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 ARL10Q8N8L6 244 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 ADAM32Q8TC27 787 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 FAM110BQ8TC76 370 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 PGBD4Q96DM1 585 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 GLT1D1Q96MS3 346 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 ARPC5LQ9BPX5 153 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 CNPY3Q9BT09 278 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 CENPOQ9BU64 300 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 C9orf16Q9BUW7 83 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 XYLT2Q9H1B5 865 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 SIAEQ9HAT2 523 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 NMRAL1Q9HBL8 299 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 MOV10Q9HCE1 1003 aaKnown RBP5.47□□□□□ -1.53
LINC01541-202ENST00000568095 DAPK2Q9UIK4 370 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 COMMD10Q9Y6G5 202 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 PTPRDP23468 1912 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 ZNF839A8K0R7 811 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 TNFRSF10AO00220 468 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 MDM4O15151 490 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 MED7O43513 233 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 NPHS1O60500 1241 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 TIPRLO75663 272 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 CABYRO75952 493 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 DNAJB5O75953 348 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 GJB1P08034 283 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 POLR2EP19388 210 aaKnown RBP5.47□□□□□ -1.53
LINC01541-202ENST00000568095 ATP6V1B2P21281 511 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 GSTM2P28161 218 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 AXLP30530 894 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 BMPR1AP36894 532 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 GMPRP36959 345 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 NR2C2P49116 596 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 ATP4BP51164 291 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 ARPC4P59998 168 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 MYL6P60660 151 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 CACNB2Q08289 660 aaPredicted RBP5.47□□□□□ -1.53
LINC01541-202ENST00000568095 AQP6Q13520 282 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 GRIK4Q16099 956 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 RAB6CQ53S08 254 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 LCN8Q6JVE9 175 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 HACE1Q8IYU2 909 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 CANT1Q8WVQ1 401 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 S100ZQ8WXG8 99 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 TMA16Q96EY4 203 aaKnown RBP5.47□□□□□ -1.53
LINC01541-202ENST00000568095 CENPNQ96H22 339 aaPredicted RBP5.47□□□□□ -1.53
LINC01541-202ENST00000568095 MYRFLQ96LU7 910 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 BCO2Q9BYV7 579 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 RAB6CQ9H0N0 254 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 MRPL46Q9H2W6 279 aaKnown RBP5.47□□□□□ -1.53
LINC01541-202ENST00000568095 MID2Q9UJV3 735 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 POU2F3Q9UKI9 436 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 ANKRD6Q9Y2G4 727 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 NAALAD2Q9Y3Q0 740 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 SCN1AP35498 2009 aa5.47□□□□□ -1.53
LINC01541-202ENST00000568095 TDRD15B5MCY1 1934 aaKnown RBP5.46□□□□□ -1.53
LINC01541-202ENST00000568095 EIF3FO00303 357 aaPredicted RBP5.46□□□□□ -1.53
LINC01541-202ENST00000568095 TNPO2O14787 897 aaKnown RBP5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms