RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ZCWPW1Q9H0M4 648 aa16.83■□□□□ 0.28
CMTM3-213ENST00000566756 COPS7BQ9H9Q2 264 aaPredicted RBP16.83■□□□□ 0.28
CMTM3-213ENST00000566756 TRPC7Q9HCX4 862 aa16.83■□□□□ 0.28
CMTM3-213ENST00000566756 ACSS2Q9NR19 701 aa16.83■□□□□ 0.28
CMTM3-213ENST00000566756 GTSE1Q9NYZ3 720 aa16.83■□□□□ 0.28
CMTM3-213ENST00000566756 PACSIN3Q9UKS6 424 aa16.83■□□□□ 0.28
CMTM3-213ENST00000566756 TBX21Q9UL17 535 aa16.83■□□□□ 0.28
CMTM3-213ENST00000566756 PRG3Q9Y2Y8 225 aaPredicted RBP16.83■□□□□ 0.28
CMTM3-213ENST00000566756 TRIM24O15164 1050 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 UBDO15205 165 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 WISP3O95389 354 aaPredicted RBP16.82■□□□□ 0.28
CMTM3-213ENST00000566756 HOXB8P17481 243 aaPredicted RBP16.82■□□□□ 0.28
CMTM3-213ENST00000566756 ACADVLP49748 655 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 RENBPP51606 427 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 NDST2P52849 883 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 PGGT1BP53609 377 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 CCL23P55773 120 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 WNT3AP56704 352 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 NFKB2Q00653 900 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 FAM45BPQ6NSW5 357 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 SPATA2LQ8IUW3 424 aaPredicted RBP16.82■□□□□ 0.28
CMTM3-213ENST00000566756 UMODL1-AS1Q8N2C9 162 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 FAM45AQ8TCE6 357 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 DDI1Q8WTU0 396 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 USP13Q92995 863 aaPredicted RBP16.82■□□□□ 0.28
CMTM3-213ENST00000566756 ARMC5Q96C12 935 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 L3HYPDHQ96EM0 354 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 DTNBP1Q96EV8 351 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 IMP4Q96G21 291 aaKnown RBP16.82■□□□□ 0.28
CMTM3-213ENST00000566756 FUBP3Q96I24 572 aaKnown RBP eCLIP16.82■□□□□ 0.28
CMTM3-213ENST00000566756 KLHL32Q96NJ5 620 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 NPAS2Q99743 824 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 PKP2Q99959 881 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 CACNA2D2Q9NY47 1150 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 IPO11Q9UI26 975 aaKnown RBP16.82■□□□□ 0.28
CMTM3-213ENST00000566756 NYNRINQ9P2P1 1898 aaKnown RBP16.82■□□□□ 0.28
CMTM3-213ENST00000566756 TMEM233B4DJY2 109 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 E9PAM4 449 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 CLPTM1O96005 669 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 SERPINH1P50454 418 aaKnown RBP16.82■□□□□ 0.28
CMTM3-213ENST00000566756 MLLT6P55198 1093 aaPredicted RBP16.82■□□□□ 0.28
CMTM3-213ENST00000566756 RHDQ02161 417 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 CSHL1Q14406 222 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 NFE2Q16621 373 aaPredicted RBP16.82■□□□□ 0.28
CMTM3-213ENST00000566756 CUZD1Q86UP6 607 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 TMA16Q96EY4 203 aaKnown RBP16.82■□□□□ 0.28
CMTM3-213ENST00000566756 SERPINB11Q96P15 392 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 ASB2Q96Q27 587 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 UHRF1Q96T88 793 aaPredicted RBP16.82■□□□□ 0.28
CMTM3-213ENST00000566756 SLC25A23Q9BV35 468 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 SLC2A11Q9BYW1 496 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 UBAP1Q9NZ09 502 aa16.82■□□□□ 0.28
CMTM3-213ENST00000566756 ANKRD33BA6NCL7 494 aa16.81■□□□□ 0.28
CMTM3-213ENST00000566756 PSMD12O00232 456 aaPredicted RBP16.81■□□□□ 0.28
CMTM3-213ENST00000566756 TNFRSF10BO14763 440 aa16.81■□□□□ 0.28
CMTM3-213ENST00000566756 PEX11BO96011 259 aa16.81■□□□□ 0.28
CMTM3-213ENST00000566756 TFAP2AP05549 437 aa16.81■□□□□ 0.28
CMTM3-213ENST00000566756 SNRPB2P08579 225 aaKnown RBP16.81■□□□□ 0.28
CMTM3-213ENST00000566756 IMPDH1P20839 514 aa16.81■□□□□ 0.28
CMTM3-213ENST00000566756 RFC2P35250 354 aa16.81■□□□□ 0.28
CMTM3-213ENST00000566756 GJA8P48165 433 aa16.81■□□□□ 0.28
CMTM3-213ENST00000566756 ELAVL2Q12926 359 aaKnown RBP16.81■□□□□ 0.28
CMTM3-213ENST00000566756 SEPT6Q14141 434 aa16.81■□□□□ 0.28
CMTM3-213ENST00000566756 FASTKQ14296 549 aaKnown RBP16.81■□□□□ 0.28
CMTM3-213ENST00000566756 C8orf82Q6P1X6 216 aaPredicted RBP16.81■□□□□ 0.28
CMTM3-213ENST00000566756 SPATA24Q86W54 205 aa16.81■□□□□ 0.28
CMTM3-213ENST00000566756 PEX13Q92968 403 aa16.81■□□□□ 0.28
CMTM3-213ENST00000566756 MARK4Q96L34 752 aa16.81■□□□□ 0.28
CMTM3-213ENST00000566756 OLFM1Q99784 485 aa16.81■□□□□ 0.28
CMTM3-213ENST00000566756 MFSD1Q9H3U5 465 aa16.81■□□□□ 0.28
CMTM3-213ENST00000566756 SPAG4Q9NPE6 437 aa16.81■□□□□ 0.28
CMTM3-213ENST00000566756 MARCH5Q9NX47 278 aa16.81■□□□□ 0.28
CMTM3-213ENST00000566756 PTTG2Q9NZH5 202 aa16.81■□□□□ 0.28
CMTM3-213ENST00000566756 LTBP2Q14767 1821 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 FAM58BPP0C7Q3 252 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 SLC2A3P11169 496 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 HNRNPLP14866 589 aaKnown RBP eCLIP16.8■□□□□ 0.28
CMTM3-213ENST00000566756 FGFR3P22607 806 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 SLC5A3P53794 718 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 VARS2Q5ST30 1063 aaKnown RBP16.8■□□□□ 0.28
CMTM3-213ENST00000566756 RBM20Q5T481 1227 aaKnown RBP16.8■□□□□ 0.28
CMTM3-213ENST00000566756 REP15Q6BDI9 236 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 CNKSR3Q6P9H4 555 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 BORAQ6PGQ7 559 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 GK5Q6ZS86 529 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 SATL1Q86VE3 508 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 CILP2Q8IUL8 1156 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 SPATA6LQ8N4H0 392 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 HMGCLL1Q8TB92 370 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 CASP10Q92851 521 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 ADA2Q9NZK5 511 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 CD300AQ9UGN4 299 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 LZTS1Q9Y250 596 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 TCRBV3S1A0A5B6 114 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 MROH6A6NGR9 719 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 OR6C75A6NL08 312 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 STX16-NPEPL1H3BU86 382 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 CCDC166P0CW27 439 aa16.8■□□□□ 0.28
CMTM3-213ENST00000566756 ZNF26P17031 533 aaPredicted RBP16.8■□□□□ 0.28
CMTM3-213ENST00000566756 CHRNA4P43681 627 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms