RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 ACAP2Q15057 778 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 RNF148Q8N7C7 305 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 SNX31Q8N9S9 440 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 WBP2Q969T9 261 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 CNDP1Q96KN2 507 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 CYP2S1Q96SQ9 504 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 S100A14Q9HCY8 104 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 UBA2Q9UBT2 640 aaPredicted RBP18.75■□□□□ 0.59
MSLN-207ENST00000566549 SPO11Q9Y5K1 396 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 ENO3P13929 434 aaPredicted RBP18.75■□□□□ 0.59
MSLN-207ENST00000566549 PMLP29590 882 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 C1QTNF8P60827 252 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 HECTD3Q5T447 861 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 CLEC6AQ6EIG7 209 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 CRIPAKQ8N1N5 446 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 LRRC43Q8N309 656 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 BRSK1Q8TDC3 778 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 UCMAQ8WVF2 138 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 USP13Q92995 863 aaPredicted RBP18.75■□□□□ 0.59
MSLN-207ENST00000566549 PTERQ96BW5 349 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 TTLL2Q9BWV7 592 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 VN1R3Q9BXE9 311 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 YY1AP1Q9H869 796 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 CATSPERZQ9NTU4 200 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 SMPD4Q9NXE4 827 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 A0A0U1RQS6 177 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 UBA6A0AVT1 1052 aaPredicted RBP18.74■□□□□ 0.59
MSLN-207ENST00000566549 RPP40O75818 363 aaKnown RBP18.74■□□□□ 0.59
MSLN-207ENST00000566549 SUPT7LO94864 414 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 PPP1R3AQ16821 1122 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 MRNIPQ6NTE8 343 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.74■□□□□ 0.59
MSLN-207ENST00000566549 ISCA2Q86U28 154 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 LMNTD2Q8IXW0 634 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 DSELQ8IZU8 1212 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 OR4L1Q8NH43 312 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 MAGEH1Q9H213 219 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 ZNF385DQ9H6B1 395 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 H3BNC9 293 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 HOXA2O43364 376 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 SP100P23497 879 aaPredicted RBP18.74■□□□□ 0.59
MSLN-207ENST00000566549 ATXN3P54252 364 aaPredicted RBP18.74■□□□□ 0.59
MSLN-207ENST00000566549 MTTPP55157 894 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 PLD1Q13393 1074 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 PTPRRQ15256 657 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 ZRSR2Q15696 482 aaKnown RBP18.74■□□□□ 0.59
MSLN-207ENST00000566549 SLC14A2Q15849 920 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 FAM45BPQ6NSW5 357 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 IZUMO2Q6UXV1 221 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 LINGO4Q6UY18 593 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 BBS5Q8N3I7 341 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 KYQ8NBH2 561 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 SLAIN1Q8ND83 568 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 RP9Q8TA86 221 aaKnown RBP18.74■□□□□ 0.59
MSLN-207ENST00000566549 FAM45AQ8TCE6 357 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 C2orf15Q8WU43 125 aaKnown RBP18.74■□□□□ 0.59
MSLN-207ENST00000566549 ZNF184Q99676 751 aaPredicted RBP18.74■□□□□ 0.59
MSLN-207ENST00000566549 NPAS2Q99743 824 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 MGME1Q9BQP7 344 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 TMEM175Q9BSA9 504 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 CCDC28BQ9BUN5 200 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 RNF38Q9H0F5 515 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 ZBTB26Q9HCK0 441 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 SEPT3Q9UH03 358 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 PCDHGC4Q9Y5F7 938 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 LAMA3Q16787 3333 aa18.74■□□□□ 0.59
MSLN-207ENST00000566549 C2orf78A6NCI8 922 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 TRPC5OSA6NMA1 111 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 UBFD1O14562 309 aaKnown RBP18.73■□□□□ 0.59
MSLN-207ENST00000566549 KIF3CO14782 793 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 FKBP6O75344 327 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 NDST3O95803 873 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 RHOCP08134 193 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 CDH4P55283 916 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 CDH13P55290 713 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 PKNOX1P55347 436 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 TIAL1Q01085 375 aaKnown RBP eCLIP18.73■□□□□ 0.59
MSLN-207ENST00000566549 USP41Q3LFD5 358 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 SLC8B1Q6J4K2 584 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 RNF111Q6ZNA4 994 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 GK5Q6ZS86 529 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 TMCO2Q7Z6W1 182 aaPredicted RBP18.73■□□□□ 0.59
MSLN-207ENST00000566549 CPSF7Q8N684 471 aaKnown RBP18.73■□□□□ 0.59
MSLN-207ENST00000566549 TRIB3Q96RU7 358 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 CDRT15Q96T59 188 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 UNC93B1Q9H1C4 597 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 COMMD8Q9NX08 183 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 PCDH10Q9P2E7 1040 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 MTRRQ9UBK8 725 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 STX16-NPEPL1H3BU86 382 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 STC2O76061 302 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 TUFMP49411 452 aaKnown RBP18.73■□□□□ 0.59
MSLN-207ENST00000566549 BLMHQ13867 455 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 TAF12Q16514 161 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 GLT6D1Q7Z4J2 308 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 LPCAT1Q8NF37 534 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 OR4K2Q8NGD2 314 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 BHMTQ93088 406 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 CCDC126Q96EE4 140 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 ZBED2Q9BTP6 218 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms