RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CD58P19256 250 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 SHMT1P34896 483 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 PPM1FP49593 454 aaPredicted RBP4.82□□□□□ -1.64
UBR1-205ENST00000564540 RPP30P78346 268 aaKnown RBP4.82□□□□□ -1.64
UBR1-205ENST00000564540 ARL16Q0P5N6 197 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 TRPC3Q13507 836 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 TNFAIP1Q13829 316 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 RNPS1Q15287 305 aaKnown RBP4.82□□□□□ -1.64
UBR1-205ENST00000564540 TCTN1Q2MV58 587 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 C2orf68Q2NKX9 166 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 EIF2S3LQ2VIR3 472 aaKnown RBP4.82□□□□□ -1.64
UBR1-205ENST00000564540 KRTAP24-1Q3LI83 254 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 SLC9B1Q4ZJI4 515 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 TXNDC8Q6A555 127 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 KRTAP5-4Q6L8H1 288 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 CPLX2Q6PUV4 134 aaKnown RBP4.82□□□□□ -1.64
UBR1-205ENST00000564540 LCTLQ6UWM7 567 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 UNQ6126/PRO20091Q6UXV3 157 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 TUBA1AQ71U36 451 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 SATL1Q86VE3 508 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 BEST2Q8NFU1 509 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 NOC3LQ8WTT2 800 aaKnown RBP4.82□□□□□ -1.64
UBR1-205ENST00000564540 APOPT1Q96IL0 206 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 KLHL15Q96M94 604 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 TUBA1CQ9BQE3 449 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 TKTL2Q9H0I9 626 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 KCNN2Q9H2S1 579 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 EVA1AQ9H8M9 152 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 SDF2L1Q9HCN8 221 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 C1RLQ9NZP8 487 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 STON1Q9Y6Q2 735 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 A0A0G2JPF8 293 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 HNRNPCL3B7ZW38 293 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 ZNF587BE7ETH6 402 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 BMPR1BO00238 502 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 LDLRAD4O15165 306 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 XPNPEP2O43895 674 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 HNRNPCL1O60812 293 aaKnown RBP4.81□□□□□ -1.64
UBR1-205ENST00000564540 PLGP00747 810 aaPredicted RBP4.81□□□□□ -1.64
UBR1-205ENST00000564540 TFP02787 698 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 UMODP07911 640 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 HNRNPCL4P0DMR1 293 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 SRCP12931 536 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 DGKAP23743 735 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 KRTAP5-9P26371 169 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 MAPK9P45984 424 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 ECT2LQ008S8 904 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 ACSM2AQ08AH3 577 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 CAMK1Q14012 370 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 GPR68Q15743 365 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 HIST2H2ACQ16777 129 aaPredicted RBP4.81□□□□□ -1.64
UBR1-205ENST00000564540 GFI1BQ5VTD9 330 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 MEX3BQ6ZN04 569 aaKnown RBP4.81□□□□□ -1.64
UBR1-205ENST00000564540 C9orf139Q6ZV77 190 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 LINGO2Q7L985 606 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 RRM2BQ7LG56 351 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 EXOC3L1Q86VI1 746 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 ZBTB2Q8N680 514 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 ZCCHC10Q8TBK6 192 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 FIG4Q92562 907 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 CD101Q93033 1021 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 HVCN1Q96D96 273 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 PABPC5Q96DU9 382 aaKnown RBP4.81□□□□□ -1.64
UBR1-205ENST00000564540 SPRY4Q9C004 299 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 UBTD1Q9HAC8 227 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 C17orf75Q9HAS0 396 aa4.81□□□□□ -1.64
UBR1-205ENST00000564540 WDR81Q562E7 1941 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 TMEM202A6NGA9 273 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 NCAM2O15394 837 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 LINC01565O15544 149 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 RFPL2O75678 378 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 COX7A2P14406 83 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 AMD1P17707 334 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 ZNF132P52740 706 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 SLC36A4Q6YBV0 504 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 SMIM29Q86T20 159 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 ZNF354CQ86Y25 554 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 DSELQ8IZU8 1212 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 KBTBD3Q8NAB2 608 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 MYRIPQ8NFW9 859 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 HUS1BQ8NHY5 278 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 NR4A3Q92570 626 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 HTRA1Q92743 480 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 USP13Q92995 863 aaPredicted RBP4.8□□□□□ -1.64
UBR1-205ENST00000564540 KIF1BPQ96EK5 621 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 TMEM19Q96HH6 336 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 PLEKHA4Q9H4M7 779 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 EBF2Q9HAK2 575 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 FBXO9Q9UK97 447 aaPredicted RBP4.8□□□□□ -1.64
UBR1-205ENST00000564540 TBX20Q9UMR3 447 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 VDAC3Q9Y277 283 aa4.8□□□□□ -1.64
UBR1-205ENST00000564540 A0A0B4J293 547 aa4.79□□□□□ -1.64
UBR1-205ENST00000564540 SNAP23O00161 211 aa4.79□□□□□ -1.64
UBR1-205ENST00000564540 HOXC11O43248 304 aaPredicted RBP4.79□□□□□ -1.64
UBR1-205ENST00000564540 PYGLP06737 847 aa4.79□□□□□ -1.64
UBR1-205ENST00000564540 DDIT3P35638 169 aa4.79□□□□□ -1.64
UBR1-205ENST00000564540 VAMP2P63027 116 aa4.79□□□□□ -1.64
UBR1-205ENST00000564540 SLC20A2Q08357 652 aa4.79□□□□□ -1.64
UBR1-205ENST00000564540 CTF1Q16619 201 aa4.79□□□□□ -1.64
UBR1-205ENST00000564540 SLC45A4Q5BKX6 768 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms