RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 SPON2Q9BUD6 331 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 ZNF700Q9H0M5 742 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 RSPH9Q9H1X1 276 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-210ENST00000561817 ZDHHC7Q9NXF8 308 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 NKIRAS1Q9NYS0 192 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 VPS51Q9UID3 782 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 GGT7Q9UJ14 662 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 GGA2Q9UJY4 613 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 LSM7Q9UK45 103 aaKnown RBP6.58□□□□□ -1.36
CAPN3-210ENST00000561817 EMCNQ9ULC0 261 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 RIMKLBQ9ULI2 386 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 PLLPQ9Y342 182 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 PCDHGB7Q9Y5F8 929 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 HCFC2Q9Y5Z7 792 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 MYOFQ9NZM1 2061 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 BPTFQ12830 3046 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 CXorf51AA0A1B0GTR3 108 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 HEATR9A2RTY3 570 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 TCP11X1B4DZS4 312 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 NDUFAB1O14561 156 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 PER2O15055 1255 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 INSIG1O15503 277 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 FZD6O60353 706 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 LPXNO60711 386 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 TMCC1O94876 653 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 NDST3O95803 873 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 BPNT1O95861 308 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 TOP3BO95985 862 aaKnown RBP6.57□□□□□ -1.36
CAPN3-210ENST00000561817 MT-CO1P00395 513 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 AHSGP02765 367 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 FGF1P05230 155 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 CEBPBP17676 345 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 HLA-DPA1P20036 260 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 CA4P22748 312 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 CES1P23141 567 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 CD70P32970 193 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 MASP1P48740 699 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 NUMBP49757 651 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 ARSDP51689 593 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 HNRNPH2P55795 449 aaKnown RBP6.57□□□□□ -1.36
CAPN3-210ENST00000561817 NSUN2Q08J23 767 aaKnown RBP eCLIP6.57□□□□□ -1.36
CAPN3-210ENST00000561817 LMAN2Q12907 356 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 TRAF2Q12933 501 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 PDE1CQ14123 709 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-210ENST00000561817 ZNF235Q14590 738 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 SUZ12Q15022 739 aaKnown RBP6.57□□□□□ -1.36
CAPN3-210ENST00000561817 CNGA3Q16281 694 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 PCSK7Q16549 785 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 DBN1Q16643 649 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 DUSP6Q16828 381 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 TMEM95Q3KNT9 176 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 MPPE1Q53F39 396 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 LGSNQ5TDP6 509 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 MROH9Q5TGP6 573 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 CES4AQ5XG92 561 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 FSTL4Q6MZW2 842 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 LVRNQ6Q4G3 990 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 LINGO4Q6UY18 593 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 KDELC2Q7Z4H8 507 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 STRA8Q7Z7C7 330 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 KIAA0907Q7Z7F0 614 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-210ENST00000561817 CLEC14AQ86T13 490 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 ZC3HC1Q86WB0 502 aaKnown RBP6.57□□□□□ -1.36
CAPN3-210ENST00000561817 MFSD6LQ8IWD5 586 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 PGBD3Q8N328 593 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 CARNMT1Q8N4J0 409 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 DCLK2Q8N568 766 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 SLC25A41Q8N5S1 370 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 PAF1Q8N7H5 531 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 C2CD4AQ8NCU7 369 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-210ENST00000561817 PPHLN1Q8NEY8 458 aaKnown RBP6.57□□□□□ -1.36
CAPN3-210ENST00000561817 GDAP1Q8TB36 358 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 CDKL2Q92772 493 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 PTPRN2Q92932 1015 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 PEX13Q92968 403 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 RSPRY1Q96DX4 576 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 LRRC3BQ96PB8 259 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 GCNAQ96QF7 691 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 SRPK1Q96SB4 655 aaKnown RBP6.57□□□□□ -1.36
CAPN3-210ENST00000561817 GPR22Q99680 433 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 FSD1LQ9BXM9 530 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 TDRD1Q9BXT4 1180 aaKnown RBP6.57□□□□□ -1.36
CAPN3-210ENST00000561817 GRIP2Q9C0E4 1043 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 VPS11Q9H270 941 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 SRA1Q9HD15 236 aaKnown RBP6.57□□□□□ -1.36
CAPN3-210ENST00000561817 IARS2Q9NSE4 1012 aaKnown RBP6.57□□□□□ -1.36
CAPN3-210ENST00000561817 C20orf96Q9NUD7 363 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-210ENST00000561817 ZFATQ9P243 1243 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 MTO1Q9Y2Z2 717 aaKnown RBP6.57□□□□□ -1.36
CAPN3-210ENST00000561817 KCTD3Q9Y597 815 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 SPO11Q9Y5K1 396 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 IKBKGQ9Y6K9 419 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 NUP210Q8TEM1 1887 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-210ENST00000561817 C2orf16Q68DN1 1984 aa6.57□□□□□ -1.36
CAPN3-210ENST00000561817 ANKRD36A6QL64 1941 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 RANBP2P49792 3224 aaKnown RBP6.56□□□□□ -1.36
CAPN3-210ENST00000561817 KIF26AQ9ULI4 1882 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-210ENST00000561817 CCDC195A0A1B0GUA6 201 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 CCDC78A2IDD5 438 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 ERICH4A6NGS2 130 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms