RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 INSIG1O15503 277 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 PRPF4O43172 522 aaKnown RBP eCLIP7.57□□□□□ -1.2
TPM1-231ENST00000561395 UGT1A9O60656 530 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 FAM155BO75949 473 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 CD160O95971 181 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 EPOP01588 193 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 FGF1P05230 155 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 BRAFP15056 766 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 CREB1P16220 341 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 HLA-DPA1P20036 260 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 CES1P23141 567 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 NMBRP28336 390 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 CD70P32970 193 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 MDH1P40925 334 aaKnown RBP7.57□□□□□ -1.2
TPM1-231ENST00000561395 CHRNA4P43681 627 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 FNTBP49356 437 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 SERPINB9P50453 376 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 SERPINH1P50454 418 aaKnown RBP7.57□□□□□ -1.2
TPM1-231ENST00000561395 PLK1P53350 603 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 GNGT1P63211 74 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 SATB1Q01826 763 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 GUCY1A3Q02108 690 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 CDK18Q07002 472 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 SLC12A1Q13621 1099 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 CCDC6Q16204 474 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 PLEKHG6Q3KR16 790 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 TUBB8Q3ZCM7 444 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 INO80DQ53TQ3 878 aaPredicted RBP7.57□□□□□ -1.2
TPM1-231ENST00000561395 SIRPB2Q5JXA9 342 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 PKN3Q6P5Z2 889 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 LINGO4Q6UY18 593 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 KDELC2Q7Z4H8 507 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 TMEM25Q86YD3 366 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 ARID3BQ8IVW6 561 aaPredicted RBP7.57□□□□□ -1.2
TPM1-231ENST00000561395 APCDD1Q8J025 514 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 CNPY4Q8N129 248 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 ZNF687Q8N1G0 1237 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 SLC25A41Q8N5S1 370 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 KIAA1958Q8N8K9 716 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 ZNF557Q8N988 423 aaPredicted RBP7.57□□□□□ -1.2
TPM1-231ENST00000561395 MDM1Q8TC05 714 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 CDKL2Q92772 493 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 GATA6Q92908 595 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 ACDQ96AP0 544 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 CENPTQ96BT3 561 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 MTBPQ96DY7 904 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 NSMCE3Q96MG7 304 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 NUDCD1Q96RS6 583 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 TRIB3Q96RU7 358 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 RANBP9Q96S59 729 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 TMUB1Q9BVT8 246 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 REPIN1Q9BWE0 567 aaKnown RBP7.57□□□□□ -1.2
TPM1-231ENST00000561395 TRABDQ9H4I3 376 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 UGT1A7Q9HAW7 530 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 UGT1A10Q9HAW8 530 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 UGT1A8Q9HAW9 530 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 NOD2Q9HC29 1040 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 SSU72Q9NP77 194 aaKnown RBP7.57□□□□□ -1.2
TPM1-231ENST00000561395 PPANQ9NQ55 473 aaKnown RBP7.57□□□□□ -1.2
TPM1-231ENST00000561395 CHRAC1Q9NRG0 131 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 PLK2Q9NYY3 685 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 MARK1Q9P0L2 795 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 KIAA1522Q9P206 1035 aaPredicted RBP7.57□□□□□ -1.2
TPM1-231ENST00000561395 ZFATQ9P243 1243 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 SLC17A6Q9P2U8 582 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 CLEC4EQ9ULY5 219 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 PCNX2A6NKB5 2137 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 PI4KAP42356 2102 aa7.57□□□□□ -1.2
TPM1-231ENST00000561395 A0A1W2PPM1 405 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 HEATR9A2RTY3 570 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 FAM47DPA6NHR8 397 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 TRIM49D1C9J1S8 452 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 NEDD8-MDP1E9PL57 170 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 KRT38O76015 456 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 NDST3O95803 873 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 SNRPAP09012 282 aaKnown RBP7.56□□□□□ -1.2
TPM1-231ENST00000561395 ZNF806P0C7X5 589 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 ERVK-10P10266 1014 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 CHN1P15882 459 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 ADRA1DP25100 572 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 CNTFP26441 200 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 HLA-FP30511 346 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 LSP1P33241 339 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 CNR2P34972 360 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 SCNN1BP51168 640 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 NOVA1P51513 510 aaKnown RBP7.56□□□□□ -1.2
TPM1-231ENST00000561395 RHOAP61586 193 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 NSUN2Q08J23 767 aaKnown RBP eCLIP7.56□□□□□ -1.2
TPM1-231ENST00000561395 MSLNQ13421 630 aaPredicted RBP7.56□□□□□ -1.2
TPM1-231ENST00000561395 SEPT6Q14141 434 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 FUT11Q495W5 492 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 RALGPS1Q5JS13 557 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 LGSNQ5TDP6 509 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 PDPK2PQ6A1A2 396 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 TTC19Q6DKK2 380 aaPredicted RBP7.56□□□□□ -1.2
TPM1-231ENST00000561395 KIAA0930Q6ICG6 404 aaPredicted RBP7.56□□□□□ -1.2
TPM1-231ENST00000561395 PACS1Q6VY07 963 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 CEP68Q76N32 757 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 METTL3Q86U44 580 aaKnown RBP7.56□□□□□ -1.2
TPM1-231ENST00000561395 KCNMB4Q86W47 210 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms