RNA–Protein interactions for RNA: ENST00000561279.5

IDH3A-222, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 4

Gene IDH3A, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-222	ENST00000561279	ZFP36L1	Q07352	338 aa	Known RBP	13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	MAMLD1	Q13495	774 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	PEX6	Q13608	980 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	TMCO4	Q5TGY1	634 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	TMEM164	Q5U3C3	297 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	RFX8	Q6ZV50	586 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	DPPA4	Q7L190	304 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	ZSWIM9	Q86XI8	627 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	PSTK	Q8IV42	348 aa	Known RBP	13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	ZSCAN1	Q8NBB4	408 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	SGF29	Q96ES7	293 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	ARHGAP9	Q9BRR9	750 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	WDR26	Q9H7D7	661 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	CYP4F12	Q9HCS2	524 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	FGF22	Q9HCT0	170 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	GPATCH2L	Q9NWQ4	482 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	SEPT3	Q9UH03	358 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	PCSK1N	Q9UHG2	260 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	MYO6	Q9UM54	1294 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279	MGA	Q8IWI9	3026 aa		13.91	□□□□□ -0.18
IDH3A-222	ENST00000561279		B4DGG1	531 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	TEX33	O43247	280 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	NOBOX	O60393	691 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	SFTPC	P11686	197 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	HGF	P14210	728 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	RGR	P47804	291 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	OGDH	Q02218	1023 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	RALGDS	Q12967	914 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	BIRC2	Q13490	618 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	SPECC1L	Q69YQ0	1117 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	PLEKHA7	Q6IQ23	1121 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	PNCK	Q6P2M8	343 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	SPRED1	Q7Z699	444 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	PIM3	Q86V86	326 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	BBS5	Q8N3I7	341 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	ZNF599	Q96NL3	588 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	PSKH2	Q96QS6	385 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	SNRNP25	Q9BV90	132 aa	Known RBP	13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	FAM117A	Q9C073	453 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	B3GNT4	Q9C0J1	378 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	TMEM168	Q9H0V1	697 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	ZWILCH	Q9H900	591 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	MRPL40	Q9NQ50	206 aa	Known RBP	13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	ZNF462	Q96JM2	2506 aa		13.9	□□□□□ -0.18
IDH3A-222	ENST00000561279	PRSS38	A1L453	326 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	RHPN2P1	A8MT19	583 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279		A8MX80	341 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	TRAFD1	O14545	582 aa	Predicted RBP	13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	EFS	O43281	561 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	SLC28A2	O43868	658 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	KALRN	O60229	2985 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	ITGB2	P05107	769 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	MYCLP1	P12525	358 aa	Predicted RBP	13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	CD82	P27701	267 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	HSPA9	P38646	679 aa	Known RBP	13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	KCNC4	Q03721	635 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	ILF3	Q12906	894 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	LBR	Q14739	615 aa	Known RBP	13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	TGIF1	Q15583	401 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	CLPP	Q16740	277 aa	Predicted RBP	13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	CA9	Q16790	459 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	MANEA	Q5SRI9	462 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	PHF19	Q5T6S3	580 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	CLEC17A	Q6ZS10	378 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	RBM43	Q6ZSC3	357 aa	Known RBP	13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	IRF2BP2	Q7Z5L9	587 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	FNIP1	Q8TF40	1166 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	GSDMC	Q9BYG8	508 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	LMBRD1	Q9NUN5	540 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	RNF215	Q9Y6U7	377 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279	LRP4	O75096	1905 aa		13.89	□□□□□ -0.19
IDH3A-222	ENST00000561279		A0A1W2PQC6	194 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	TMEM191C	A6NGB0	347 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	TMCO5B	A8MYB1	307 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	CPNE6	O95741	557 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	CYP2A6	P11509	494 aa	Predicted RBP	13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	GZMA	P12544	262 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	ATP1A3	P13637	1013 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	KRT10	P13645	584 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	CCNB1	P14635	433 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	MIP	P30301	263 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	ARL4A	P40617	200 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	MAPK10	P53779	464 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	ZNF235	Q14590	738 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	STX1A	Q16623	288 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	MAP9	Q49MG5	647 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	NYAP1	Q6ZVC0	841 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	ARHGAP12	Q8IWW6	846 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	GPBAR1	Q8TDU6	330 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	NSMCE1	Q8WV22	266 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	SPOCK2	Q92563	424 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	USP7	Q93009	1102 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	NUS1	Q96E22	293 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	COQ10A	Q96MF6	247 aa		13.88	□□□□□ -0.19
IDH3A-222	ENST00000561279	KCTD15	Q96SI1	283 aa	Predicted RBP	13.88	□□□□□ -0.19

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