RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PM20D1Q6GTS8 502 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 TMEM214Q6NUQ4 689 aaKnown RBP14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 FAM117BQ6P1L5 589 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 CASC4Q6P4E1 433 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 TMEM26Q6ZUK4 368 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 IGFN1Q86VF2 1251 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 METTL23Q86XA0 190 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 HERC6Q8IVU3 1022 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 EDEM1Q92611 657 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 ALPK1Q96QP1 1244 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 OR52B2Q96RD2 323 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 PKMYT1Q99640 499 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 SLC29A1Q99808 456 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 COLEC11Q9BWP8 271 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 WDR12Q9GZL7 423 aaKnown RBP14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 ZBTB26Q9HCK0 441 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 XPNPEP3Q9NQH7 507 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 DKK3Q9UBP4 350 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 VTI1BQ9UEU0 232 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 IFT52Q9Y366 437 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 DNAH12Q6ZR08 3092 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 A0A0U1RQF3 1178 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 J3QRK9 145 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 KCNK1O00180 336 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 PLOD2O00469 737 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 HDAC3O15379 428 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 CA12O43570 354 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 RSL1D1O76021 490 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 B3GAT3O94766 335 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 CPNE6O95741 557 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 ASGR1P07306 291 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 HSPA1AP0DMV8 641 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 HSPA1BP0DMV9 641 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 PGAM1P18669 254 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 PTPN3P26045 913 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 GARSP41250 739 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 BRCC3P46736 316 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 FLT3LGP49771 235 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 PRKAA2P54646 552 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 KCNA10Q16322 511 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 PAN2Q504Q3 1202 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 PID1Q7Z2X4 250 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 CAMK1DQ8IU85 385 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 NPWQ8N729 165 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 RAB2BQ8WUD1 216 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 FBXL8Q96CD0 374 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 PGBD4Q96DM1 585 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 NDEL1Q9GZM8 345 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 SEMA6AQ9H2E6 1030 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 GPN2Q9H9Y4 310 aaPredicted RBP14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 POLR1BQ9H9Y6 1135 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 MOV10Q9HCE1 1003 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 TMLHEQ9NVH6 421 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 PIH1D1Q9NWS0 290 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 CORINQ9Y5Q5 1042 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 SNX13Q9Y5W8 968 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 SNX10Q9Y5X0 201 aa14.02□□□□□ -0.17
RABGGTA-220ENST00000560998 PTPRDP23468 1912 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 M0QZQ0 153 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 NCAM2O15394 837 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 NDUFB5O43674 189 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 BDNFP23560 247 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 CACNB2Q08289 660 aaPredicted RBP14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 SEL1L3Q68CR1 1132 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 GALNT18Q6P9A2 607 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 TAC4Q86UU9 113 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 SCML4Q8N228 414 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 ATP6V0D2Q8N8Y2 350 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 KLHDC9Q8NEP7 349 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 MAPK15Q8TD08 544 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 ISL2Q96A47 359 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 CIB1Q99828 191 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 NAT9Q9BTE0 207 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 ILKAPQ9H0C8 392 aaPredicted RBP14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 UNC93B1Q9H1C4 597 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 WDCPQ9H6R7 721 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 ARMC1Q9NVT9 282 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 SYBUQ9NX95 663 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 KLHL8Q9P2G9 620 aaPredicted RBP14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 ANKMY1Q9P2S6 941 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 ADAM28Q9UKQ2 775 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 DSEQ9UL01 958 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 SARDHQ9UL12 918 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 CNOT6Q9ULM6 557 aaKnown RBP14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 RAP2CQ9Y3L5 183 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 NOX1Q9Y5S8 564 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 PATJQ8NI35 1801 aa14.01□□□□□ -0.17
RABGGTA-220ENST00000560998 NLRC5Q86WI3 1866 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 TMX2-CTNND1H3BSU7 103 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 JUNBP17275 347 aaPredicted RBP14□□□□□ -0.17
RABGGTA-220ENST00000560998 TM4SF4P48230 202 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 ZNF135P52742 658 aaPredicted RBP14□□□□□ -0.17
RABGGTA-220ENST00000560998 TRAF2Q12933 501 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 TUSC3Q13454 348 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 BSPRYQ5W0U4 402 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 ABRAXAS1Q6UWZ7 409 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 ERMP1Q7Z2K6 904 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 OR13F1Q8NGS4 319 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 OR10T2Q8NGX3 314 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms