RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 FGF1P05230 155 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 TSPAN7P41732 249 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 HDAC4P56524 1084 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 TAF3Q5VWG9 929 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 AFMIDQ63HM1 303 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 LIPIQ6XZB0 460 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 ZNF677Q86XU0 584 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 CACNA2D3Q8IZS8 1091 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 UMODL1-AS1Q8N2C9 162 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 RCBTB1Q8NDN9 531 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 C9orf43Q8TAL5 461 aaPredicted RBP18.6■□□□□ 0.57
TPM1-226ENST00000560959 CCDC74BQ96LY2 380 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 EFHD1Q9BUP0 239 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 GSDMCQ9BYG8 508 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 CYP4F12Q9HCS2 524 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 TRNAU1APQ9NX07 287 aaKnown RBP18.6■□□□□ 0.57
TPM1-226ENST00000560959 B3GALT1Q9Y5Z6 326 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 LRRK1Q38SD2 2015 aa18.59■□□□□ 0.57
TPM1-226ENST00000560959 USP9YO00507 2555 aaPredicted RBP18.59■□□□□ 0.57
TPM1-226ENST00000560959 PRSS38A1L453 326 aa18.59■□□□□ 0.57
TPM1-226ENST00000560959 MMP8P22894 467 aa18.59■□□□□ 0.57
TPM1-226ENST00000560959 EPHB2P29323 1055 aa18.59■□□□□ 0.57
TPM1-226ENST00000560959 CSTF2P33240 577 aaKnown RBP eCLIP18.59■□□□□ 0.57
TPM1-226ENST00000560959 MTIF2P46199 727 aaKnown RBP18.59■□□□□ 0.57
TPM1-226ENST00000560959 RAB15P59190 212 aa18.59■□□□□ 0.57
TPM1-226ENST00000560959 POLR2LP62875 67 aaKnown RBP18.59■□□□□ 0.57
TPM1-226ENST00000560959 NAA35Q5VZE5 725 aa18.59■□□□□ 0.57
TPM1-226ENST00000560959 PNCKQ6P2M8 343 aa18.59■□□□□ 0.57
TPM1-226ENST00000560959 SLFN11Q7Z7L1 901 aa18.59■□□□□ 0.57
TPM1-226ENST00000560959 NOP9Q86U38 636 aaKnown RBP18.59■□□□□ 0.57
TPM1-226ENST00000560959 NRROSQ86YC3 692 aa18.59■□□□□ 0.57
TPM1-226ENST00000560959 CCDC185Q8N715 623 aa18.59■□□□□ 0.57
TPM1-226ENST00000560959 ZDHHC1Q8WTX9 485 aa18.59■□□□□ 0.57
TPM1-226ENST00000560959 TEFMQ96QE5 360 aaKnown RBP18.59■□□□□ 0.57
TPM1-226ENST00000560959 LGR4Q9BXB1 951 aa18.59■□□□□ 0.57
TPM1-226ENST00000560959 WDR26Q9H7D7 661 aa18.59■□□□□ 0.57
TPM1-226ENST00000560959 KCTD5Q9NXV2 234 aa18.59■□□□□ 0.57
TPM1-226ENST00000560959 DONSONQ9NYP3 566 aa18.59■□□□□ 0.57
TPM1-226ENST00000560959 UBA2Q9UBT2 640 aaPredicted RBP18.59■□□□□ 0.57
TPM1-226ENST00000560959 SDK2Q58EX2 2172 aa18.59■□□□□ 0.57
TPM1-226ENST00000560959 RAD1O60671 282 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 ELFN1P0C7U0 828 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 MAP4P27816 1152 aaKnown RBP18.58■□□□□ 0.56
TPM1-226ENST00000560959 MAZP56270 477 aaKnown RBP18.58■□□□□ 0.56
TPM1-226ENST00000560959 ILF3Q12906 894 aaKnown RBP eCLIP18.58■□□□□ 0.56
TPM1-226ENST00000560959 RALGDSQ12967 914 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 RAPGEF1Q13905 1077 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 MAN2A1Q16706 1144 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 CRTC2Q53ET0 693 aaPredicted RBP18.58■□□□□ 0.56
TPM1-226ENST00000560959 C4orf17Q53FE4 359 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 DCAF12Q5T6F0 453 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 KLHDC7AQ5VTJ3 777 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 ZSWIM9Q86XI8 627 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 CAMK1DQ8IU85 385 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 NETO2Q8NC67 525 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 GPT2Q8TD30 523 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 ART4Q93070 314 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 ECHDC3Q96DC8 303 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 EXOC2Q96KP1 924 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 NAA15Q9BXJ9 866 aaKnown RBP18.58■□□□□ 0.56
TPM1-226ENST00000560959 SPRY4Q9C004 299 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 NDST4Q9H3R1 872 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 ATP13A3Q9H7F0 1226 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 CATSPERBQ9H7T0 1116 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 SLC39A1Q9NY26 324 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 PILRAQ9UKJ1 303 aa18.58■□□□□ 0.56
TPM1-226ENST00000560959 ECEL1O95672 775 aa18.57■□□□□ 0.56
TPM1-226ENST00000560959 CYP1A1P04798 512 aaPredicted RBP18.57■□□□□ 0.56
TPM1-226ENST00000560959 MMEP08473 750 aa18.57■□□□□ 0.56
TPM1-226ENST00000560959 THRAP10827 490 aa18.57■□□□□ 0.56
TPM1-226ENST00000560959 MYCLP1P12525 358 aaPredicted RBP18.57■□□□□ 0.56
TPM1-226ENST00000560959 SERPINA4P29622 427 aa18.57■□□□□ 0.56
TPM1-226ENST00000560959 CD97P48960 835 aa18.57■□□□□ 0.56
TPM1-226ENST00000560959 DPPA4Q7L190 304 aa18.57■□□□□ 0.56
TPM1-226ENST00000560959 EPS8L1Q8TE68 723 aa18.57■□□□□ 0.56
TPM1-226ENST00000560959 FAM172AQ8WUF8 416 aa18.57■□□□□ 0.56
TPM1-226ENST00000560959 APOBEC4Q8WW27 367 aaKnown RBP18.57■□□□□ 0.56
TPM1-226ENST00000560959 PMEPA1Q969W9 287 aa18.57■□□□□ 0.56
TPM1-226ENST00000560959 STK33Q9BYT3 514 aa18.57■□□□□ 0.56
TPM1-226ENST00000560959 PDFQ9HBH1 243 aa18.57■□□□□ 0.56
TPM1-226ENST00000560959 TAAR2Q9P1P5 351 aa18.57■□□□□ 0.56
TPM1-226ENST00000560959 PDP2Q9P2J9 529 aa18.57■□□□□ 0.56
TPM1-226ENST00000560959 MOSPD1Q9UJG1 213 aa18.57■□□□□ 0.56
TPM1-226ENST00000560959 NBASA2RRP1 2371 aa18.57■□□□□ 0.56
TPM1-226ENST00000560959 GM2AP17900 193 aa18.56■□□□□ 0.56
TPM1-226ENST00000560959 AIF1P55008 147 aa18.56■□□□□ 0.56
TPM1-226ENST00000560959 GSCP56915 257 aaPredicted RBP18.56■□□□□ 0.56
TPM1-226ENST00000560959 GPLD1P80108 840 aa18.56■□□□□ 0.56
TPM1-226ENST00000560959 MC1RQ01726 317 aa18.56■□□□□ 0.56
TPM1-226ENST00000560959 NSUN2Q08J23 767 aaKnown RBP eCLIP18.56■□□□□ 0.56
TPM1-226ENST00000560959 TMEM71Q6P5X7 295 aa18.56■□□□□ 0.56
TPM1-226ENST00000560959 SRLQ86TD4 932 aa18.56■□□□□ 0.56
TPM1-226ENST00000560959 JOSD2Q8TAC2 188 aa18.56■□□□□ 0.56
TPM1-226ENST00000560959 SPOCK2Q92563 424 aa18.56■□□□□ 0.56
TPM1-226ENST00000560959 KIAA1143Q96AT1 154 aaPredicted RBP18.56■□□□□ 0.56
TPM1-226ENST00000560959 MIB2Q96AX9 1013 aa18.56■□□□□ 0.56
TPM1-226ENST00000560959 ZPBPQ9BS86 351 aa18.56■□□□□ 0.56
TPM1-226ENST00000560959 LRRC19Q9H756 370 aa18.56■□□□□ 0.56
TPM1-226ENST00000560959 CARS2Q9HA77 564 aaKnown RBP18.56■□□□□ 0.56
TPM1-226ENST00000560959 ZNF71Q9NQZ8 489 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms