RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 ELAVL3Q14576 367 aaKnown RBP5.52□□□□□ -1.53
ZEB1-220ENST00000560909 ZNF235Q14590 738 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 PON2Q15165 354 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 PPP1R7Q15435 360 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 TRADDQ15628 312 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 EMC10Q5UCC4 262 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 EGFLAMQ63HQ2 1017 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 C8orf74Q6P047 294 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 CCNI2Q6ZMN8 369 aaPredicted RBP5.52□□□□□ -1.53
ZEB1-220ENST00000560909 DPY19L3Q6ZPD9 716 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 ARHGEF18Q6ZSZ5 1173 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 TPRG1Q6ZUI0 275 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 ZNF534Q76KX8 674 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 GSTA5Q7RTV2 222 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 PCGF5Q86SE9 256 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 CAND1Q86VP6 1230 aaKnown RBP5.52□□□□□ -1.53
ZEB1-220ENST00000560909 RELL1Q8IUW5 271 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 PPIL6Q8IXY8 311 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 LRRC56Q8IYG6 542 aaPredicted RBP5.52□□□□□ -1.53
ZEB1-220ENST00000560909 CBARPQ8N350 705 aaPredicted RBP5.52□□□□□ -1.53
ZEB1-220ENST00000560909 ATP11CQ8NB49 1132 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 BBOF1Q8ND07 529 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 TMIEQ8NEW7 156 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 MYRIPQ8NFW9 859 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 TTC8Q8TAM2 541 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 CYB5D2Q8WUJ1 264 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 PIH1D2Q8WWB5 315 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 PRCCQ92733 491 aaPredicted RBP5.52□□□□□ -1.53
ZEB1-220ENST00000560909 EDAQ92838 391 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 SNF8Q96H20 258 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 FEM1CQ96JP0 617 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 RPL10LQ96L21 214 aaKnown RBP5.52□□□□□ -1.53
ZEB1-220ENST00000560909 CCDC114Q96M63 670 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 GDAP1L1Q96MZ0 367 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 AGAP3Q96P47 875 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 UBL7Q96S82 380 aaPredicted RBP5.52□□□□□ -1.53
ZEB1-220ENST00000560909 LYSMD1Q96S90 227 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 ACOX2Q99424 681 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 SEMA3CQ99985 751 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 C19orf43Q9BQ61 176 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 TRIM51Q9BSJ1 452 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 IER2Q9BTL4 223 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 CINPQ9BW66 212 aaPredicted RBP5.52□□□□□ -1.53
ZEB1-220ENST00000560909 CEP41Q9BYV8 373 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 CIPCQ9C0C6 399 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 RAB17Q9H0T7 212 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 RSPH9Q9H1X1 276 aaPredicted RBP5.52□□□□□ -1.53
ZEB1-220ENST00000560909 NT5MQ9NPB1 228 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 LTB4R2Q9NPC1 389 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 CASS4Q9NQ75 786 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 PRSS16Q9NQE7 514 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 FAM114A2Q9NRY5 505 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 DLGAP2Q9P1A6 1054 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 KLHL8Q9P2G9 620 aaPredicted RBP5.52□□□□□ -1.53
ZEB1-220ENST00000560909 FAM153AQ9UHL3 310 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 SLC25A13Q9UJS0 675 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 MRPS17Q9Y2R5 130 aaKnown RBP5.52□□□□□ -1.53
ZEB1-220ENST00000560909 AAR2Q9Y312 384 aaKnown RBP5.52□□□□□ -1.53
ZEB1-220ENST00000560909 UTP11Q9Y3A2 253 aaKnown RBP5.52□□□□□ -1.53
ZEB1-220ENST00000560909 STON1Q9Y6Q2 735 aa5.52□□□□□ -1.53
ZEB1-220ENST00000560909 NYNRINQ9P2P1 1898 aaKnown RBP5.51□□□□□ -1.53
ZEB1-220ENST00000560909 TCRBV7S3A2A0A539 114 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 SERTM1A2A2V5 107 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 AP3B1O00203 1094 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 EIF3HO15372 352 aaKnown RBP eCLIP5.51□□□□□ -1.53
ZEB1-220ENST00000560909 PPFIA2O75334 1257 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 TMEM63AO94886 807 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 PGLSO95336 258 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 NDST3O95803 873 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 IGSF6O95976 241 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 MT-CYBP00156 380 aaPredicted RBP5.51□□□□□ -1.53
ZEB1-220ENST00000560909 IGLV3-19P01714 112 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 CTSLP07711 333 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 SERPINF2P08697 491 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 ALADP13716 330 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 PRKCHP24723 683 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 HOXA6P31267 233 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 ACTN2P35609 894 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 CARSP49589 748 aaKnown RBP5.51□□□□□ -1.53
ZEB1-220ENST00000560909 SUOXP51687 545 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 CCNHP51946 323 aaPredicted RBP5.51□□□□□ -1.53
ZEB1-220ENST00000560909 MAXP61244 160 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 ST8SIA6P61647 398 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 MRPS25P82663 173 aaKnown RBP5.51□□□□□ -1.53
ZEB1-220ENST00000560909 SLC7A5Q01650 507 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 DSC2Q02487 901 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 GUCY2DQ02846 1103 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 ZBTB16Q05516 673 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 CDK18Q07002 472 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 SIGLEC14Q08ET2 396 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 TRAF2Q12933 501 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 TRIP13Q15645 432 aaPredicted RBP5.51□□□□□ -1.53
ZEB1-220ENST00000560909 CDKN3Q16667 212 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 ERCC6LQ2NKX8 1250 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 FAM182AQ5T1J6 154 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 ATXN7L2Q5T6C5 722 aaPredicted RBP5.51□□□□□ -1.53
ZEB1-220ENST00000560909 ANKRD22Q5VYY1 191 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 LRRC8BQ6P9F7 803 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 LEKR1Q6ZMV7 388 aa5.51□□□□□ -1.53
ZEB1-220ENST00000560909 SYT13Q7L8C5 426 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms