RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	LZTR1	Q8N653	840 aa		13.7	□□□□□ -0.22
RNF31-223	ENST00000560754	TMEM74	Q96NL1	305 aa		13.7	□□□□□ -0.22
RNF31-223	ENST00000560754	ZNF599	Q96NL3	588 aa		13.7	□□□□□ -0.22
RNF31-223	ENST00000560754	CCNL2	Q96S94	520 aa	Predicted RBP	13.7	□□□□□ -0.22
RNF31-223	ENST00000560754	SNRNP25	Q9BV90	132 aa	Known RBP	13.7	□□□□□ -0.22
RNF31-223	ENST00000560754	LGR4	Q9BXB1	951 aa		13.7	□□□□□ -0.22
RNF31-223	ENST00000560754	SEMA4C	Q9C0C4	833 aa		13.7	□□□□□ -0.22
RNF31-223	ENST00000560754	RTN4	Q9NQC3	1192 aa	Known RBP	13.7	□□□□□ -0.22
RNF31-223	ENST00000560754	SIRPG	Q9P1W8	387 aa		13.7	□□□□□ -0.22
RNF31-223	ENST00000560754	PCSK1N	Q9UHG2	260 aa		13.7	□□□□□ -0.22
RNF31-223	ENST00000560754	CACNB4	O00305	520 aa	Predicted RBP	13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	DAPK3	O43293	454 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	HTRA2	O43464	458 aa	Predicted RBP	13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	ZIC2	O95409	532 aa	Predicted RBP	13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	PEX11B	O96011	259 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	FTL	P02792	175 aa	Predicted RBP	13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	FUCA1	P04066	466 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	PCCB	P05166	539 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	RPLP0	P05388	317 aa	Known RBP	13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	KEL	P23276	732 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	SCNN1B	P51168	640 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	AP1S1	P61966	158 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	SLC10A7	Q0GE19	358 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	DPYS	Q14117	519 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	LY6D	Q14210	128 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	STX1A	Q16623	288 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	TP53INP2	Q8IXH6	220 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	PELI3	Q8N2H9	469 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	NPW	Q8N729	165 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	FAM46D	Q8NEK8	389 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	GPBAR1	Q8TDU6	330 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	TMEM159	Q96B96	161 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	MED8	Q96G25	268 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	PDXP	Q96GD0	296 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	COQ10A	Q96MF6	247 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	CINP	Q9BW66	212 aa	Predicted RBP	13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	TRIM7	Q9C029	511 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	STRADB	Q9C0K7	418 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	TMEM168	Q9H0V1	697 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	FGF22	Q9HCT0	170 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	MRPL40	Q9NQ50	206 aa	Known RBP	13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	KCTD5	Q9NXV2	234 aa		13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	13.69	□□□□□ -0.22
RNF31-223	ENST00000560754	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.68	□□□□□ -0.22
RNF31-223	ENST00000560754		A0A1W2PQ67	120 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	TMCO5B	A8MYB1	307 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754		B8ZZF3	427 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	PDE2A	O00408	941 aa	Predicted RBP	13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	B4GAT1	O43505	415 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	NUDT21	O43809	227 aa	Known RBP	13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	PRPSAP2	O60256	369 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	LRCH4	O75427	683 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	ELFN1	P0C7U0	828 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	CR2	P20023	1033 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	PCK1	P35558	622 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	PRKCI	P41743	596 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	LBR	Q14739	615 aa	Known RBP	13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	TCEA2	Q15560	299 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	TMCO4	Q5TGY1	634 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	TAF8	Q7Z7C8	310 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	CCNJL	Q8IV13	435 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	SFTPA2	Q8IWL1	248 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	TEX101	Q9BY14	249 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	FOXP3	Q9BZS1	431 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	HAUS4	Q9H6D7	363 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	EPB41L5	Q9HCM4	733 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	CYP4F12	Q9HCS2	524 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	LRIT1	Q9P2V4	623 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	SEPT3	Q9UH03	358 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	ZFC3H1	O60293	1989 aa	Known RBP	13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	FLNC	Q14315	2725 aa		13.68	□□□□□ -0.22
RNF31-223	ENST00000560754	LRRC53	A6NM62	1247 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754		A8MX80	341 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	DFFA	O00273	331 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	DDX3X	O00571	662 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	ATMIN	O43313	823 aa	Predicted RBP	13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	CEACAM5	P06731	702 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	B4GALNT1	Q00973	533 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	C14orf28	Q4W4Y0	310 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	BOLA3	Q53S33	107 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	KIAA1614	Q5VZ46	1190 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	XKR5	Q6UX68	686 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	SPRED1	Q7Z699	444 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	NRROS	Q86YC3	692 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754		Q8N9G6	341 aa	Predicted RBP	13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	CCL4L1	Q8NHW4	92 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	B3GNT4	Q9C0J1	378 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	ISCU	Q9H1K1	167 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	SP110	Q9HB58	689 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	PPIL1	Q9Y3C6	166 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	PCDHGC4	Q9Y5F7	938 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	RNF215	Q9Y6U7	377 aa		13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	UBR5	O95071	2799 aa	Predicted RBP	13.67	□□□□□ -0.22
RNF31-223	ENST00000560754	PRSS38	A1L453	326 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	TTC24	A2A3L6	582 aa	Predicted RBP	13.66	□□□□□ -0.22

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