RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 IFT52Q9Y366 437 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 ZNF536O15090 1300 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 FRMPD4Q14CM0 1322 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 KIAA1551Q9HCM1 1747 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 KRBA1A5PL33 1030 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 ALOX15BO15296 676 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 PRPF4O43172 522 aaKnown RBP eCLIP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 CDH16O75309 829 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 CHEK2O96017 543 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 TK1P04183 234 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 HEXBP07686 556 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 ENO2P09104 434 aaPredicted RBP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 NR2F1P10589 423 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 THRAP10827 490 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 BMP1P13497 986 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 DRD2P14416 443 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 FDFT1P37268 417 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 EPS15P42566 896 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 AP3M2P53677 418 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 RAD23AP54725 363 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 C21orf59P57076 290 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 RPS6KA2Q15349 733 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 EFHC2Q5JST6 749 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 C1orf146Q5VVC0 180 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 MAST2Q6P0Q8 1798 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 KYAT3Q6YP21 454 aaKnown RBP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 RNF111Q6ZNA4 994 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 RFPL4BQ6ZWI9 263 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 ULK2Q8IYT8 1036 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 LILRB4Q8NHJ6 448 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 CALML6Q8TD86 181 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 KCNE4Q8WWG9 221 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 CELF1Q92879 486 aaKnown RBP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 FEM1CQ96JP0 617 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 C16orf92Q96LL3 132 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 AGAP2Q99490 1192 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 OLFM1Q99784 485 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 LDAHQ9H6V9 325 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 DNAJC17Q9NVM6 304 aaKnown RBP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 ZMYM2Q9UBW7 1377 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 SLC7A8Q9UHI5 535 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 ADAMTS6Q9UKP5 1117 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 AMFRQ9UKV5 643 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 GRID1Q9ULK0 1009 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 PLA2G4CQ9UP65 541 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 UBR3Q6ZT12 1888 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 BRWD3Q6RI45 1802 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 SYNJ2BP-COX16A0A087WUM0 186 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 A0A1W2PRG0 241 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 CASQ2O14958 399 aaPredicted RBP6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 ZBTB11O95625 1053 aaPredicted RBP6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 KRT75O95678 551 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 TTC4O95801 387 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 TGM1P22735 817 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 TM4SF1P30408 202 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 SLC16A2P36021 539 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 DIO1P49895 249 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 HNRNPFP52597 415 aaKnown RBP6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 SOX8P57073 446 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 ACTR2P61160 394 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 TRA2BP62995 288 aaKnown RBP6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 IRX4P78413 519 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 MYBPC1Q00872 1141 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 EDRF1Q3B7T1 1238 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 LEXMQ3ZCV2 418 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 TRAPPC3LQ5T215 181 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 DCAF12L1Q5VU92 463 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 CENPPQ6IPU0 288 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 CCDC25Q86WR0 208 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 MMAAQ8IVH4 418 aaKnown RBP6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 LCORLQ8N3X6 602 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 BANPQ8N9N5 519 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 SUN5Q8TC36 379 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 MTBPQ96DY7 904 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 PGAP3Q96FM1 320 aaPredicted RBP6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 FAM84BQ96KN1 310 aaPredicted RBP6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 SAMD11Q96NU1 681 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 SIAEQ9HAT2 523 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 CNGB3Q9NQW8 809 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 STK17AQ9UEE5 414 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 GNPTGQ9UJJ9 305 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 KLHL20Q9Y2M5 609 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 MTO1Q9Y2Z2 717 aaKnown RBP6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 ST14Q9Y5Y6 855 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 SLC4A4Q9Y6R1 1079 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 TK2O00142 265 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 TNPO2O14787 897 aaKnown RBP6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 AURKAO14965 403 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 VEGFDO43915 354 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 CLASP2O75122 1294 aaKnown RBP6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 STAMBPO95630 424 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 PAHP00439 452 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 LRG1P02750 347 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 CETPP11597 493 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 LAMP2P13473 410 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 S100A5P33763 92 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 GYG1P46976 350 aa6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 MRPS9P82933 396 aaKnown RBP6.78□□□□□ -1.32
TSPAN3-209ENST00000560715 TARDBPQ13148 414 aaKnown RBP eCLIP6.78□□□□□ -1.324e-14■■□□□ 14.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms