RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 EML3Q32P44 896 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 TAF1BQ53T94 588 aaPredicted RBP12.71□□□□□ -0.37
USP3-213ENST00000559711 FAM78AQ5JUQ0 283 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 ATG16L1Q676U5 607 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 C22orf39Q6P5X5 142 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 AFTPHQ6ULP2 937 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 RAPH1Q70E73 1250 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 GPR149Q86SP6 731 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 CEP97Q8IW35 865 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 PLPP6Q8IY26 295 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 PCDH20Q8N6Y1 951 aaKnown RBP12.71□□□□□ -0.37
USP3-213ENST00000559711 CCDC63Q8NA47 563 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 ABHD8Q96I13 439 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 ELMO2Q96JJ3 720 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 ASB16Q96NS5 453 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 TUBGCP5Q96RT8 1024 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 PLCD4Q9BRC7 762 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 TSSK1BQ9BXA7 367 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 CPEB1Q9BZB8 566 aaKnown RBP12.71□□□□□ -0.37
USP3-213ENST00000559711 TNKS2Q9H2K2 1166 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 CATSPERZQ9NTU4 200 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 DUS2Q9NX74 493 aaKnown RBP12.71□□□□□ -0.37
USP3-213ENST00000559711 GDE1Q9NZC3 331 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 COPG2Q9UBF2 871 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 SLC25A13Q9UJS0 675 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 CORO1CQ9ULV4 474 aaPredicted RBP12.71□□□□□ -0.37
USP3-213ENST00000559711 ARL2BPQ9Y2Y0 163 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 ACOT9Q9Y305 439 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 CEP290O15078 2479 aa12.71□□□□□ -0.38
USP3-213ENST00000559711 H7C0S8 307 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 PHGDHO43175 533 aaKnown RBP12.7□□□□□ -0.38
USP3-213ENST00000559711 HOXC11O43248 304 aaPredicted RBP12.7□□□□□ -0.38
USP3-213ENST00000559711 TGDSO95455 350 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 CYP17A1P05093 508 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 HOXB8P17481 243 aaPredicted RBP12.7□□□□□ -0.38
USP3-213ENST00000559711 ALDH3A1P30838 453 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 VASPP50552 380 aaPredicted RBP12.7□□□□□ -0.38
USP3-213ENST00000559711 EPHB1P54762 984 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 BST1Q10588 318 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 PCLAFQ15004 111 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 CHI3L2Q15782 390 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 FASTKD1Q53R41 847 aaKnown RBP12.7□□□□□ -0.38
USP3-213ENST00000559711 RARS2Q5T160 578 aaKnown RBP12.7□□□□□ -0.38
USP3-213ENST00000559711 RBM20Q5T481 1227 aaKnown RBP12.7□□□□□ -0.38
USP3-213ENST00000559711 TMEM215Q68D42 235 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 MBLAC2Q68D91 279 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 SDCCAG8Q86SQ7 713 aaPredicted RBP12.7□□□□□ -0.38
USP3-213ENST00000559711 CENPLQ8N0S6 344 aaPredicted RBP12.7□□□□□ -0.38
USP3-213ENST00000559711 AHI1Q8N157 1196 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 OTUD6BQ8N6M0 293 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 GPATCH11Q8N954 259 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 OR6K2Q8NGY2 324 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 FGF13Q92913 245 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 SMARCD2Q92925 531 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 PPP2R3CQ969Q6 453 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 TCF12Q99081 682 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 TRPV4Q9HBA0 871 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 NMRAL1Q9HBL8 299 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 OBP2AQ9NY56 170 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 IL17CQ9P0M4 197 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 VWA7Q9Y334 891 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 PDE4DIPQ5VU43 2346 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 HELZP42694 1942 aaKnown RBP12.7□□□□□ -0.38
USP3-213ENST00000559711 BPTFQ12830 3046 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 A0A087X1B8 175 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 A0A0J9YYE9 177 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 STX7O15400 261 aaKnown RBP12.7□□□□□ -0.38
USP3-213ENST00000559711 SNNO75324 88 aaPredicted RBP12.7□□□□□ -0.38
USP3-213ENST00000559711 PIGNO95427 931 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 POP4O95707 220 aaKnown RBP12.7□□□□□ -0.38
USP3-213ENST00000559711 TRBC1P01850 177 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 APOA4P06727 396 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 CISD3P0C7P0 127 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 CPA3P15088 417 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 SAT1P21673 171 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 SERPINA4P29622 427 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 HMGCLP35914 325 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 VIPR2P41587 438 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 STC1P52823 247 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 IRX4P78413 519 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 SF3A3Q12874 501 aaKnown RBP eCLIP12.7□□□□□ -0.381e-7■■■■□ 19.8
USP3-213ENST00000559711 SEMA3AQ14563 771 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 PTPRRQ15256 657 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 CARD16Q5EG05 197 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 HECTD2Q5U5R9 776 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 CES4AQ5XG92 561 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 CCDC91Q7Z6B0 441 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 LDB1Q86U70 411 aaPredicted RBP12.7□□□□□ -0.38
USP3-213ENST00000559711 TMEM151AQ8N4L1 468 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 EFHBQ8N7U6 833 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 PNPLA1Q8N8W4 532 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 OR6Y1Q8NGX8 325 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 BPIFB1Q8TDL5 484 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 ECHDC3Q96DC8 303 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 TSPAN17Q96FV3 270 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 C7orf26Q96N11 449 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 GPR78Q96P69 363 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 OLFM1Q99784 485 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 INTS10Q9NVR2 710 aaKnown RBP12.7□□□□□ -0.38
USP3-213ENST00000559711 KLHL14Q9P2G3 628 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms