RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 LRMDAQ9H2I8 198 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 ZNHIT2Q9UHR6 403 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 FBXO5Q9UKT4 447 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 SOX13Q9UN79 622 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 FOXO6A8MYZ6 492 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 OASLQ15646 514 aaKnown RBP10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 PDK4Q16654 411 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 GRTP1Q5TC63 336 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 CEP68Q76N32 757 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 MRPL43Q8N983 215 aaKnown RBP10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 OR4K2Q8NGD2 314 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 ZNF483Q8TF39 744 aaPredicted RBP10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 SPATA17Q96L03 361 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 PCDH10Q9P2E7 1040 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 GABRDO14764 452 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 CNTN5O94779 1100 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 ACVRL1P37023 503 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 ADARP55265 1226 aaKnown RBP10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 ECT2LQ008S8 904 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 SEMG2Q02383 582 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 SHHQ15465 462 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 HIST2H2ACQ16777 129 aaPredicted RBP10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 SCARA3Q6AZY7 606 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 HIST2H2AA3Q6FI13 130 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 C11orf96Q7Z7L8 435 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 DEFB107AQ8IZN7 70 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 STK40Q8N2I9 435 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 LINC01465Q8N7H1 131 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 CYB5D2Q8WUJ1 264 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 KLHL32Q96NJ5 620 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 QKIQ96PU8 341 aaKnown RBP eCLIP10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 CPNE1Q99829 537 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 SYBUQ9NX95 663 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 CXXC1Q9P0U4 656 aaPredicted RBP10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 RAB23Q9ULC3 237 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 SLC12A4Q9UP95 1085 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 ACTL7BQ9Y614 415 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 CDK5RAP2Q96SN8 1893 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 MYH7BA7E2Y1 1941 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 MEI4A8MW99 385 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 RFXAPO00287 272 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 GSTA4O15217 222 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 INSIG1O15503 277 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 PGM3O95394 542 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 PSMC3P17980 439 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 HTR1BP28222 390 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 HALP42357 657 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 MAPK9P45984 424 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 USP46P62068 366 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 GRM3Q14832 879 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 MS4A13Q5J8X5 152 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 DDHD1Q8NEL9 900 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 HERVK_113Q902F9 699 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 KXD1Q9BQD3 176 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 EBF2Q9HAK2 575 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 TBX21Q9UL17 535 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 ORC6Q9Y5N6 252 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 SNX5Q9Y5X3 404 aa10.69□□□□□ -0.7
CARMIL3-202ENST00000559694 URB1O60287 2271 aaKnown RBP10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 KIAA0355O15063 1070 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 ADAM12O43184 909 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 SMNDC1O75940 238 aaKnown RBP eCLIP10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 CPA3P15088 417 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 PTPN3P26045 913 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 TCHHL1Q5QJ38 904 aaPredicted RBP10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 MCOLN3Q8TDD5 553 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 JADE3Q92613 823 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 COPS8Q99627 209 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 WRAP53Q9BUR4 548 aaKnown RBP10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 NSUN3Q9H649 340 aaKnown RBP10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 STX18Q9P2W9 335 aaKnown RBP10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 FAM95CA0A1B0GW59 222 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 ILVBLA1L0T0 632 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 SYCE1LA8MT33 242 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 MYOGP15173 224 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 FOSL2P15408 326 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 CREB1P16220 341 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 IL10P22301 178 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 VIPR2P41587 438 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 RPS6KA3P51812 740 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 NRLP54845 237 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 SLC10A7Q0GE19 358 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 LRRC73Q5JTD7 316 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 C6orf10Q5SRN2 563 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 ARMC3Q5W041 872 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 TTC27Q6P3X3 843 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 BBS7Q8IWZ6 715 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 ZFYVE19Q96K21 471 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 TEKT5Q96M29 485 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 DENND2DQ9H6A0 471 aaPredicted RBP10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 TRIM43BA6NCK2 446 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 AGRPO00253 132 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 SLC31A1O15431 190 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 H2AFYO75367 372 aaKnown RBP10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 GABRB2P47870 512 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 PSMD7P51665 324 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 PLK1P53350 603 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 MGAT3Q09327 533 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms