RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 GRK7Q8WTQ7 553 aa17.5■□□□□ 0.39
TPM1-214ENST00000558544 DNASE2BQ8WZ79 361 aa17.5■□□□□ 0.39
TPM1-214ENST00000558544 TMEM131Q92545 1883 aa17.5■□□□□ 0.39
TPM1-214ENST00000558544 LOXL4Q96JB6 756 aa17.5■□□□□ 0.39
TPM1-214ENST00000558544 MYOCQ99972 504 aa17.5■□□□□ 0.39
TPM1-214ENST00000558544 SLC17A9Q9BYT1 436 aa17.5■□□□□ 0.39
TPM1-214ENST00000558544 ARRDC1-AS1Q9H2J1 176 aa17.5■□□□□ 0.39
TPM1-214ENST00000558544 FZD3Q9NPG1 666 aa17.5■□□□□ 0.39
TPM1-214ENST00000558544 TMEM74BQ9NUR3 256 aa17.5■□□□□ 0.39
TPM1-214ENST00000558544 CDC23Q9UJX2 597 aa17.5■□□□□ 0.39
TPM1-214ENST00000558544 GMEB2Q9UKD1 530 aa17.5■□□□□ 0.39
TPM1-214ENST00000558544 TPX2Q9ULW0 747 aaKnown RBP17.5■□□□□ 0.39
TPM1-214ENST00000558544 GPR179Q6PRD1 2367 aa17.49■□□□□ 0.39
TPM1-214ENST00000558544 CCDC188H7C350 402 aa17.49■□□□□ 0.39
TPM1-214ENST00000558544 SLC31A1O15431 190 aa17.49■□□□□ 0.39
TPM1-214ENST00000558544 HEXIM1O94992 359 aaKnown RBP17.49■□□□□ 0.39
TPM1-214ENST00000558544 ECEL1O95672 775 aa17.49■□□□□ 0.39
TPM1-214ENST00000558544 EPOP01588 193 aa17.49■□□□□ 0.39
TPM1-214ENST00000558544 HLA-DPA1P20036 260 aa17.49■□□□□ 0.39
TPM1-214ENST00000558544 ARHGEF7Q14155 803 aa17.49■□□□□ 0.39
TPM1-214ENST00000558544 LRRC66Q68CR7 880 aa17.49■□□□□ 0.39
TPM1-214ENST00000558544 KCTD11Q693B1 232 aa17.49■□□□□ 0.39
TPM1-214ENST00000558544 CRTC1Q6UUV9 634 aa17.49■□□□□ 0.39
TPM1-214ENST00000558544 SLC6A18Q96N87 628 aa17.49■□□□□ 0.39
TPM1-214ENST00000558544 TBL1YQ9BQ87 522 aa17.49■□□□□ 0.39
TPM1-214ENST00000558544 LRRC40Q9H9A6 602 aa17.49■□□□□ 0.39
TPM1-214ENST00000558544 PILRBQ9UKJ0 227 aa17.49■□□□□ 0.39
TPM1-214ENST00000558544 GOLGA8CPA6NN73 597 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 E7EVH7 732 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 LZTS3O60299 673 aaPredicted RBP17.48■□□□□ 0.39
TPM1-214ENST00000558544 AP2A1O95782 977 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 GAS8O95995 478 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 PAK4O96013 591 aaPredicted RBP17.48■□□□□ 0.39
TPM1-214ENST00000558544 FGF1P05230 155 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 RETP07949 1114 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 MPLP40238 635 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 LMAN1P49257 510 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 TERF1P54274 439 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 BASP1P80723 227 aaKnown RBP17.48■□□□□ 0.39
TPM1-214ENST00000558544 C2orf54Q08AI8 447 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 GPS1Q13098 491 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 SGCGQ13326 291 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 SEMA5AQ13591 1074 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 ACOX1Q15067 660 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 CCDC6Q16204 474 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 C4orf22Q6V702 233 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 SYT12Q8IV01 421 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 KIF18AQ8NI77 898 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 LRRC45Q96CN5 670 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 SERAC1Q96JX3 654 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 LYSMD1Q96S90 227 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 C1QTNF2Q9BXJ5 285 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 NCDNQ9UBB6 729 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 PCYOX1Q9UHG3 505 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 FEZ2Q9UHY8 353 aaPredicted RBP17.48■□□□□ 0.39
TPM1-214ENST00000558544 NEU2Q9Y3R4 380 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 ZNF106Q9H2Y7 1883 aaKnown RBP17.48■□□□□ 0.39
TPM1-214ENST00000558544 OTOGLQ3ZCN5 2332 aa17.48■□□□□ 0.39
TPM1-214ENST00000558544 C1orf232A0A0U1RR37 186 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 RAD51BO15315 384 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 PSMD3O43242 534 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 CLDN7O95471 211 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 SLC4A1P02730 911 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 GM2AP17900 193 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 NUDT1P36639 197 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 PPP1R7Q15435 360 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 PEAR1Q5VY43 1037 aaPredicted RBP17.47■□□□□ 0.39
TPM1-214ENST00000558544 NAPEPLDQ6IQ20 393 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 RANBP10Q6VN20 620 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 SPATA4Q8NEY3 305 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 C1orf216Q8TAB5 229 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 RUNDC3BQ96NL0 473 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 KRT12Q99456 494 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 SMOC1Q9H4F8 434 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 TM9SF3Q9HD45 589 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 SHOC2Q9UQ13 582 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 DMTF1Q9Y222 760 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 CA5BQ9Y2D0 317 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 ZNF711Q9Y462 761 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 PCDHGA5Q9Y5G8 931 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 SPO11Q9Y5K1 396 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 PCDH15Q96QU1 1955 aa17.47■□□□□ 0.39
TPM1-214ENST00000558544 CACNA1EQ15878 2313 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 ERI2A8K979 691 aaKnown RBP17.46■□□□□ 0.39
TPM1-214ENST00000558544 WNT9AO14904 365 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 RECQL5O94762 991 aaPredicted RBP17.46■□□□□ 0.39
TPM1-214ENST00000558544 APRTP07741 180 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 C1SP09871 688 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 ZNF30P17039 623 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 HNRNPA2B1P22626 353 aaKnown RBP17.46■□□□□ 0.39
TPM1-214ENST00000558544 AKT2P31751 481 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 DPP6P42658 865 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 PTGIRP43119 386 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 CKAP4Q07065 602 aaKnown RBP17.46■□□□□ 0.39
TPM1-214ENST00000558544 CDKN3Q16667 212 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 WHAMMP3Q1A5X7 153 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 ASCL5Q7RTU5 278 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 LYSMD3Q7Z3D4 306 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 HSD11B1LQ7Z5J1 315 aa17.46■□□□□ 0.39
TPM1-214ENST00000558544 BLOC1S5Q8TDH9 187 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms