RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 GP1BAP07359 652 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 SLC2A3P11169 496 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 TGM2P21980 687 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 VAC14Q08AM6 782 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 FZD2Q14332 565 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 CYP1B1Q16678 543 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 C5orf22Q49AR2 442 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 GLE1Q53GS7 698 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 ANKRD20A8PQ5CZ79 823 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 ARSIQ5FYB1 569 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 FAM72AQ5TYM5 149 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 FAM72DQ6L9T8 149 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 CCDC70Q6NSX1 233 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 ERN2Q76MJ5 926 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 STRADAQ7RTN6 431 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 FAM72BQ86X60 149 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 TMIEQ8NEW7 156 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 PCDH19Q8TAB3 1148 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 MAPK15Q8TD08 544 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 SNRNP27Q8WVK2 155 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 IFT43Q96FT9 208 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 KCTD15Q96SI1 283 aaPredicted RBP11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 DPH5Q9H2P9 285 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 LRRC19Q9H756 370 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 PCDH18Q9HCL0 1135 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 GPR27Q9NS67 375 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 ZNF446Q9NWS9 450 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 DNAJC28Q9NX36 388 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 KLF15Q9UIH9 416 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 DNPEPQ9ULA0 475 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 FZD10Q9ULW2 581 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 STAP1Q9ULZ2 295 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 AP4E1Q9UPM8 1137 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 HS3ST3A1Q9Y663 406 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 POM121BA6NF01 834 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 B8ZZF3 427 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 CASC3O15234 703 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 DAPK3O43293 454 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 PAGE1O75459 146 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 CLDN11O75508 207 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 ALPPL2P10696 532 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 PECAM1P16284 738 aaPredicted RBP11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 CETN2P41208 172 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 COPS2P61201 443 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 SKOR1P84550 965 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 TAZQ16635 292 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 CDKN3Q16667 212 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 TMEM259Q4ZIN3 620 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 ALFQ53S48 1182 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 TPRG1LQ5T0D9 272 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 WDR93Q6P2C0 686 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 GUSBP11Q6P575 273 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 ZNF683Q8IZ20 524 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 PQLC3Q8N755 202 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 ATP11CQ8NB49 1132 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 ATXN7L3BQ96GX2 97 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 MAK16Q9BXY0 300 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 HDAC8Q9BY41 377 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 DPH1Q9BZG8 443 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 SIK2Q9H0K1 926 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 ABCG4Q9H172 646 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 MUC3BQ9H195 1237 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 CWC15Q9P013 229 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 PCYOX1Q9UHG3 505 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 VPS51Q9UID3 782 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 NFU1Q9UMS0 254 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 SATB2Q9UPW6 733 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 MFHAS1Q9Y4C4 1052 aa11.3□□□□□ -0.6
RABGGTA-204ENST00000558376 CPED1A4D0V7 1026 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 NEMP2A6NFY4 417 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 CREB3O43889 395 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 C6P13671 934 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 ETS1P14921 441 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 DESP17661 470 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 AMPD1P23109 780 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 ADRA1BP35368 520 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 DUSP3P51452 185 aaPredicted RBP11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 CDH4P55283 916 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 CCNG2Q16589 344 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 C3orf38Q5JPI3 329 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 ARTNQ5T4W7 220 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 KIAA1614Q5VZ46 1190 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 IGF2-ASQ6U949 168 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 LINGO4Q6UY18 593 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 MAATS1Q7Z4T9 603 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 PTAR1Q7Z6K3 402 aaPredicted RBP11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 JAMLQ86YT9 394 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 GLIS1Q8NBF1 620 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 ZNF548Q8NEK5 533 aaPredicted RBP11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 ACTL9Q8TC94 416 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 SLC46A1Q96NT5 459 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 RNF157Q96PX1 679 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 TKTL2Q9H0I9 626 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 TNKS2Q9H2K2 1166 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 WDCPQ9H6R7 721 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 USP29Q9HBJ7 922 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 THSD1Q9NS62 852 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 ETNK2Q9NVF9 386 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 SNX24Q9Y343 169 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 FARP1Q9Y4F1 1045 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms