RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 GLOD4Q9HC38 313 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 PACSIN2Q9UNF0 486 aaPredicted RBP12.53□□□□□ -0.4
SLIRP-209ENST00000557342 CHKBQ9Y259 395 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 CABIN1Q9Y6J0 2220 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 A0A0J9YYE9 177 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 SPTY2D1-AS1A0A0U1RR47 76 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 A8MX80 341 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 H3BM21 787 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 RECQL5O94762 991 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-209ENST00000557342 HEXIM1O94992 359 aaKnown RBP12.52□□□□□ -0.41
SLIRP-209ENST00000557342 TRBC1P01850 177 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 MMP2P08253 660 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 PDHA1P08559 390 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 ZNF30P17039 623 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 EPHA8P29322 1005 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-209ENST00000557342 OTUD4Q01804 1114 aaKnown RBP12.52□□□□□ -0.41
SLIRP-209ENST00000557342 MTM1Q13496 603 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 PDE1CQ14123 709 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-209ENST00000557342 ACOX1Q15067 660 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 SHBQ15464 509 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 CNGA3Q16281 694 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 WSCD2Q2TBF2 565 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 B4GALNT4Q76KP1 1039 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 PARGQ86W56 976 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 CDKL3Q8IVW4 592 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-209ENST00000557342 ATL2Q8NHH9 583 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 ACTL9Q8TC94 416 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 SAP25Q8TEE9 199 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 HTR3CQ8WXA8 447 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 CEP41Q9BYV8 373 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 LZTFL1Q9NQ48 299 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 MBNL1Q9NR56 388 aaKnown RBP12.52□□□□□ -0.41
SLIRP-209ENST00000557342 KLHL8Q9P2G9 620 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-209ENST00000557342 TRHDEQ9UKU6 1024 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 PCOLCE2Q9UKZ9 415 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 PPP2R2CQ9Y2T4 447 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 KNL1Q8NG31 2342 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 LRP4O75096 1905 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 SPTBN4Q9H254 2564 aa12.52□□□□□ -0.41
SLIRP-209ENST00000557342 WDR87Q6ZQQ6 2873 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 CAPN8A6NHC0 703 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 NPIPB15A6NHN6 443 aaPredicted RBP12.51□□□□□ -0.41
SLIRP-209ENST00000557342 ANKRD66B4E2M5 251 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 GIPC1O14908 333 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 STK10O94804 968 aaKnown RBP12.51□□□□□ -0.41
SLIRP-209ENST00000557342 PRLP01236 227 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 PCCBP05166 539 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 CTPS1P17812 591 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 HTR1BP28222 390 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 HNF1BP35680 557 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 TNNT3P45378 269 aaPredicted RBP12.51□□□□□ -0.41
SLIRP-209ENST00000557342 EIF3EP60228 445 aaKnown RBP12.51□□□□□ -0.41
SLIRP-209ENST00000557342 HNRNPKP61978 463 aaKnown RBP eCLIP12.51□□□□□ -0.41
SLIRP-209ENST00000557342 WASHC5Q12768 1159 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 ZNF211Q13398 564 aaPredicted RBP12.51□□□□□ -0.41
SLIRP-209ENST00000557342 FZD2Q14332 565 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 IHHQ14623 411 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 TRIP6Q15654 476 aaKnown RBP12.51□□□□□ -0.41
SLIRP-209ENST00000557342 SEL1L2Q5TEA6 688 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 CCDC70Q6NSX1 233 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 AADACL2Q6P093 401 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 PID1Q7Z2X4 250 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 RAVER1Q8IY67 606 aaKnown RBP12.51□□□□□ -0.41
SLIRP-209ENST00000557342 LPCAT1Q8NF37 534 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 BTN2A2Q8WVV5 523 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 NUS1Q96E22 293 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 COQ10AQ96MF6 247 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 CAMK1GQ96NX5 476 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 RBM15Q96T37 977 aaKnown RBP eCLIP12.51□□□□□ -0.41
SLIRP-209ENST00000557342 MLPHQ9BV36 600 aaPredicted RBP12.51□□□□□ -0.41
SLIRP-209ENST00000557342 DNAJC28Q9NX36 388 aa12.51□□□□□ -0.41
SLIRP-209ENST00000557342 DCHS1Q96JQ0 3298 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 NEMP2A6NFY4 417 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 CBFA2T3O75081 653 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 CSF2P04141 144 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 ADRB1P08588 477 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 ALPIP09923 528 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 RBP3P10745 1247 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 LHCGRP22888 699 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 RBL1P28749 1068 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 BLKP51451 505 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 CDK18Q07002 472 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 BNIP3Q12983 259 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 INPP5AQ14642 412 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 RPS6KA1Q15418 735 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 HS1BP3Q53T59 392 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 MEI1Q5TIA1 1274 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 DENND2CQ68D51 928 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 ITPRIPL1Q6GPH6 555 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 ESRP1Q6NXG1 681 aaKnown RBP12.5□□□□□ -0.41
SLIRP-209ENST00000557342 DARS2Q6PI48 645 aaKnown RBP12.5□□□□□ -0.41
SLIRP-209ENST00000557342 CRTC1Q6UUV9 634 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 MACC1Q6ZN28 852 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 GLRX5Q86SX6 157 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 GATAD2AQ86YP4 633 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 ZNF567Q8N184 647 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 CBARPQ8N350 705 aaPredicted RBP12.5□□□□□ -0.41
SLIRP-209ENST00000557342 TRIM58Q8NG06 486 aa12.5□□□□□ -0.41
SLIRP-209ENST00000557342 BAHD1Q8TBE0 780 aaPredicted RBP12.5□□□□□ -0.41
SLIRP-209ENST00000557342 TADA1Q96BN2 335 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms