RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 TMEFF1Q8IYR6 380 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 TAB3Q8N5C8 712 aaPredicted RBP16.5■□□□□ 0.23
PCNX4-213ENST00000556907 MCUQ8NE86 351 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 DNASE2BQ8WZ79 361 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 TADA1Q96BN2 335 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 MLPHQ9BV36 600 aaPredicted RBP16.5■□□□□ 0.23
PCNX4-213ENST00000556907 TDRD1Q9BXT4 1180 aaKnown RBP16.5■□□□□ 0.23
PCNX4-213ENST00000556907 ADGRE3Q9BY15 652 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 TSPYL1Q9H0U9 437 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 GOLGA6AQ9NYA3 693 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 FAM153AQ9UHL3 310 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 AAR2Q9Y312 384 aaKnown RBP16.5■□□□□ 0.23
PCNX4-213ENST00000556907 PPIL1Q9Y3C6 166 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 PCDHB9Q9Y5E1 797 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 CEP192Q8TEP8 1941 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 TCRBV7S3A2A0A539 114 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 E7EVH7 732 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 NEMP1O14524 444 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 PSMD3O43242 534 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 SUN1O94901 812 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 AP2A1O95782 977 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 CPP00450 1065 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 APRTP07741 180 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 RETP07949 1114 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 MMP2P08253 660 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 CD86P42081 329 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 TNNT3P45378 269 aaPredicted RBP16.49■□□□□ 0.23
PCNX4-213ENST00000556907 GEMP55040 296 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 RPS21P63220 83 aaKnown RBP16.49■□□□□ 0.23
PCNX4-213ENST00000556907 SKOR1P84550 965 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 TRAF2Q12933 501 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 MPP3Q13368 585 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 FAM182AQ5T1J6 154 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 MREGQ8N565 214 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 ASB12Q8WXK4 309 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 OXNAD1Q96HP4 312 aaPredicted RBP16.49■□□□□ 0.23
PCNX4-213ENST00000556907 HSPA12BQ96MM6 686 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 SRPK1Q96SB4 655 aaKnown RBP16.49■□□□□ 0.23
PCNX4-213ENST00000556907 TXLNGYQ9BZA5 131 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 FAM86C1Q9NVL1 165 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 SUSD2Q9UGT4 822 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 GMEB2Q9UKD1 530 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 DMTF1Q9Y222 760 aa16.49■□□□□ 0.23
PCNX4-213ENST00000556907 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.49■□□□□ 0.23
PCNX4-213ENST00000556907 NUMA1Q14980 2115 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 TTC24A2A3L6 582 aaPredicted RBP16.48■□□□□ 0.23
PCNX4-213ENST00000556907 FAM47DPA6NHR8 397 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 MEI4A8MW99 385 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 E7ESA3 106 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 PLK4O00444 970 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 EIF3HO15372 352 aaKnown RBP eCLIP16.48■□□□□ 0.23
PCNX4-213ENST00000556907 LATO43561 262 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 RNGTTO60942 597 aaKnown RBP16.48■□□□□ 0.23
PCNX4-213ENST00000556907 LRP3O75074 770 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 GJB3O75712 270 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 PCDH8O95206 1070 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 EPN2O95208 641 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 FAM153BP0C7A2 387 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 CYP2A6P11509 494 aaPredicted RBP16.48■□□□□ 0.23
PCNX4-213ENST00000556907 CD27P26842 260 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 ABL2P42684 1182 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 DHPSP49366 369 aaPredicted RBP16.48■□□□□ 0.23
PCNX4-213ENST00000556907 EPHB1P54762 984 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 HIF1AQ16665 826 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 FAM153CQ494X1 144 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 TMEM52BQ4KMG9 183 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 BEND6Q5SZJ8 279 aaPredicted RBP16.48■□□□□ 0.23
PCNX4-213ENST00000556907 USP45Q70EL2 814 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 ZNF534Q76KX8 674 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 TMC3Q7Z5M5 1100 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 HORMAD1Q86X24 394 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 RAVER1Q8IY67 606 aaKnown RBP16.48■□□□□ 0.23
PCNX4-213ENST00000556907 CEP76Q8TAP6 659 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 PDCD6IPQ8WUM4 868 aaKnown RBP16.48■□□□□ 0.23
PCNX4-213ENST00000556907 SCRN2Q96FV2 425 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 NSMCE3Q96MG7 304 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 RBM15Q96T37 977 aaKnown RBP eCLIP16.48■□□□□ 0.23
PCNX4-213ENST00000556907 C6orf106Q9H6K1 298 aaPredicted RBP16.48■□□□□ 0.23
PCNX4-213ENST00000556907 LRRC40Q9H9A6 602 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 XAB2Q9HCS7 855 aaKnown RBP16.48■□□□□ 0.23
PCNX4-213ENST00000556907 ARFGAP3Q9NP61 516 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 PCDH12Q9NPG4 1184 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 KCTD5Q9NXV2 234 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 LRRK1Q38SD2 2015 aa16.48■□□□□ 0.23
PCNX4-213ENST00000556907 A0A1W2PPC4 97 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 PRR5-ARHGAP8B1AHC4 643 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 F5H423 210 aaPredicted RBP16.47■□□□□ 0.23
PCNX4-213ENST00000556907 FSBPO95073 299 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 MLNP12872 115 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 GNSP15586 552 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 MAGEA3P43357 314 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 GRIA4P48058 902 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 LMAN1P49257 510 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 ARL4CP56559 192 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 CDK18Q07002 472 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 SETMARQ53H47 684 aaPredicted RBP16.47■□□□□ 0.23
PCNX4-213ENST00000556907 PEAR1Q5VY43 1037 aaPredicted RBP16.47■□□□□ 0.23
PCNX4-213ENST00000556907 KDELC1Q6UW63 502 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 CYP2U1Q7Z449 544 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 RELL1Q8IUW5 271 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms