RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, human

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FCF1-208	ENST00000556814	PRSS47	A8MTI9	375 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	SMAD6	O43541	496 aa	Known RBP	4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	GAGE7	O76087	117 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	BAIAP3	O94812	1187 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	NGFR	P08138	427 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	GAGE12F	P0CL80	117 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	GAGE12G	P0CL81	117 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	GAGE12I	P0CL82	117 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	HOXA11	P31270	313 aa	Predicted RBP	4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	CASP2	P42575	452 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	RPS3A	P61247	264 aa	Known RBP	4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	LTB	Q06643	244 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	TMEM115	Q12893	351 aa	Predicted RBP	4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	GAGE1	Q13065	139 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	GAGE4	Q13068	117 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	FGFBP1	Q14512	234 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	KRT24	Q2M2I5	525 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	USP41	Q3LFD5	358 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	SGO1	Q5FBB7	561 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	ZC3HC1	Q86WB0	502 aa	Known RBP	4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	WDR63	Q8IWG1	891 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	SLC35F3	Q8IY50	421 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	ZBTB2	Q8N680	514 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	PSPC1	Q8WXF1	523 aa	Known RBP	4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	ERGIC1	Q969X5	290 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	PABPC5	Q96DU9	382 aa	Known RBP	4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	MARK4	Q96L34	752 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	FAM110A	Q9BQ89	295 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	ZPBP	Q9BS86	351 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	EHD2	Q9NZN4	543 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	DLGAP2	Q9P1A6	1054 aa		4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	LIMA1	Q9UHB6	759 aa	Known RBP	4.25	□□□□□ -1.73
FCF1-208	ENST00000556814	ATXN2	Q99700	1313 aa	Known RBP	4.24	□□□□□ -1.73
FCF1-208	ENST00000556814		A0A0U1RQJ8	604 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	CYSRT1	A8MQ03	144 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	TGFB1I1	O43294	461 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	HSPA12A	O43301	675 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	KCNAB3	O43448	404 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	PAGE4	O60829	102 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	DDX58	O95786	925 aa	Known RBP	4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	SCGB1D1	O95968	90 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	ACAA1	P09110	424 aa	Predicted RBP	4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	KRT10	P13645	584 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	STX2	P32856	288 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	ARL3	P36405	182 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	PIGA	P37287	484 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	PIP4K2A	P48426	406 aa	Predicted RBP	4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	PEX5	P50542	639 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	SORD	Q00796	357 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	NAE1	Q13564	534 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	KRT32	Q14532	448 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	GPATCH4	Q5T3I0	446 aa	Known RBP	4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	CCDC30	Q5VVM6	783 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	HAUS3	Q68CZ6	603 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	PLEKHA7	Q6IQ23	1121 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	METTL2B	Q6P1Q9	378 aa	Known RBP	4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	TSSK4	Q6SA08	328 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	DLK2	Q6UY11	383 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	ADSSL1	Q8N142	457 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	CLIP4	Q8N3C7	705 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	TMEM116	Q8NCL8	245 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	METTL2A	Q96IZ6	378 aa	Known RBP	4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	ZNF479	Q96JC4	524 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	SLC41A2	Q96JW4	573 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	HARBI1	Q96MB7	349 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	TMEM68	Q96MH6	324 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	SH3GL2	Q99962	352 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	IFIH1	Q9BYX4	1025 aa	Known RBP	4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	HIPK2	Q9H2X6	1198 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	KIF9	Q9HAQ2	790 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	GPR108	Q9NPR9	543 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	DDX4	Q9NQI0	724 aa	Known RBP	4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	SWAP70	Q9UH65	585 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	RCOR1	Q9UKL0	485 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	MKLN1	Q9UL63	735 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	CDC14A	Q9UNH5	594 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	KCNE2	Q9Y6J6	123 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	STON1	Q9Y6Q2	735 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	CAPN7	Q9Y6W3	813 aa		4.24	□□□□□ -1.73
FCF1-208	ENST00000556814	LINC01553	A4QN01	128 aa		4.23	□□□□□ -1.73
FCF1-208	ENST00000556814	CLEC18A	A5D8T8	446 aa		4.23	□□□□□ -1.73
FCF1-208	ENST00000556814	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.23	□□□□□ -1.73
FCF1-208	ENST00000556814		J3KR12	359 aa		4.23	□□□□□ -1.73
FCF1-208	ENST00000556814	SNAP23	O00161	211 aa		4.23	□□□□□ -1.73
FCF1-208	ENST00000556814	ZIC3	O60481	467 aa		4.23	□□□□□ -1.73
FCF1-208	ENST00000556814	IPO7	O95373	1038 aa	Known RBP	4.23	□□□□□ -1.73
FCF1-208	ENST00000556814	FCGR1A	P12314	374 aa		4.23	□□□□□ -1.73
FCF1-208	ENST00000556814	ZNF182	P17025	639 aa	Predicted RBP	4.23	□□□□□ -1.73
FCF1-208	ENST00000556814	CDH2	P19022	906 aa	Predicted RBP	4.23	□□□□□ -1.73
FCF1-208	ENST00000556814	NFKBIA	P25963	317 aa		4.23	□□□□□ -1.73
FCF1-208	ENST00000556814	HNRNPH1	P31943	449 aa	Known RBP	4.23	□□□□□ -1.73
FCF1-208	ENST00000556814	ICAM3	P32942	547 aa		4.23	□□□□□ -1.73
FCF1-208	ENST00000556814	RGS2	P41220	211 aa		4.23	□□□□□ -1.73
FCF1-208	ENST00000556814	METAP2	P50579	478 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
FCF1-208	ENST00000556814	NANOS2	P60321	138 aa	Known RBP	4.23	□□□□□ -1.73
FCF1-208	ENST00000556814	SEC61A1	P61619	476 aa	Known RBP	4.23	□□□□□ -1.73
FCF1-208	ENST00000556814	SET	Q01105	290 aa	Predicted RBP	4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms