RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 CRTC1Q6UUV9 634 aa17.46■□□□□ 0.39
TUBB3-211ENST00000556536 CAND1Q86VP6 1230 aaKnown RBP17.46■□□□□ 0.39
TUBB3-211ENST00000556536 HOOK3Q86VS8 718 aa17.46■□□□□ 0.39
TUBB3-211ENST00000556536 LONP2Q86WA8 852 aa17.46■□□□□ 0.39
TUBB3-211ENST00000556536 NDUFAF2Q8N183 169 aa17.46■□□□□ 0.39
TUBB3-211ENST00000556536 DNAAF3Q8N9W5 541 aa17.46■□□□□ 0.39
TUBB3-211ENST00000556536 MCUQ8NE86 351 aa17.46■□□□□ 0.39
TUBB3-211ENST00000556536 SEC14L1Q92503 715 aa17.46■□□□□ 0.39
TUBB3-211ENST00000556536 NELL1Q92832 810 aa17.46■□□□□ 0.39
TUBB3-211ENST00000556536 PWWP2AQ96N64 755 aa17.46■□□□□ 0.39
TUBB3-211ENST00000556536 WRAP53Q9BUR4 548 aaKnown RBP17.46■□□□□ 0.39
TUBB3-211ENST00000556536 BTBD1Q9H0C5 482 aa17.46■□□□□ 0.39
TUBB3-211ENST00000556536 SGK2Q9HBY8 427 aa17.46■□□□□ 0.39
TUBB3-211ENST00000556536 WHRNQ9P202 907 aa17.46■□□□□ 0.39
TUBB3-211ENST00000556536 DNAH14Q0VDD8 3507 aa17.46■□□□□ 0.39
TUBB3-211ENST00000556536 FAM47DPA6NHR8 397 aa17.45■□□□□ 0.38
TUBB3-211ENST00000556536 NEMP1O14524 444 aa17.45■□□□□ 0.38
TUBB3-211ENST00000556536 AURKAO14965 403 aa17.45■□□□□ 0.38
TUBB3-211ENST00000556536 BCKDHBP21953 392 aa17.45■□□□□ 0.38
TUBB3-211ENST00000556536 DRG2P55039 364 aaKnown RBP17.45■□□□□ 0.38
TUBB3-211ENST00000556536 SESN2P58004 480 aaPredicted RBP17.45■□□□□ 0.38
TUBB3-211ENST00000556536 ELP6Q0PNE2 266 aa17.45■□□□□ 0.38
TUBB3-211ENST00000556536 SRSF5Q13243 272 aaKnown RBP17.45■□□□□ 0.38
TUBB3-211ENST00000556536 LRRC8BQ6P9F7 803 aa17.45■□□□□ 0.38
TUBB3-211ENST00000556536 ZDHHC24Q6UX98 284 aa17.45■□□□□ 0.38
TUBB3-211ENST00000556536 BLOC1S5Q8TDH9 187 aa17.45■□□□□ 0.38
TUBB3-211ENST00000556536 SERPINB12Q96P63 405 aa17.45■□□□□ 0.38
TUBB3-211ENST00000556536 LYSMD1Q96S90 227 aa17.45■□□□□ 0.38
TUBB3-211ENST00000556536 EPC1Q9H2F5 836 aa17.45■□□□□ 0.38
TUBB3-211ENST00000556536 MAGEE1Q9HCI5 957 aa17.45■□□□□ 0.38
TUBB3-211ENST00000556536 SHOC2Q9UQ13 582 aa17.45■□□□□ 0.38
TUBB3-211ENST00000556536 ZNF711Q9Y462 761 aa17.45■□□□□ 0.38
TUBB3-211ENST00000556536 TBC1D3DA0A087WVF3 549 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 TBC1D3IA0A087WXS9 549 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 TBC1D3EA0A087X179 549 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 TBC1D3KA0A087X1G2 549 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 TBC1D3FA6NER0 549 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-211ENST00000556536 TBC1D3LB9A6J9 549 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 TSPAN6O43657 245 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 MMP20O60882 483 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 PCDH8O95206 1070 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 CLDN7O95471 211 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 SEMA4FO95754 770 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 TBC1D3HP0C7X1 549 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 CYP2A6P11509 494 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-211ENST00000556536 LIG3P49916 1009 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 PPP2CBP62714 309 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 PPP2CAP67775 309 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 CALCOCO2Q13137 446 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 CNGA3Q16281 694 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 ZNF528Q3MIS6 628 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 SEL1L3Q68CR1 1132 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 LRRC66Q68CR7 880 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 DENND2CQ68D51 928 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 TBC1D3GQ6DHY5 549 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 TBC1D3CQ6IPX1 549 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 LYSMD3Q7Z3D4 306 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 TBC1D3Q8IZP1 549 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-211ENST00000556536 TTC30BQ8N4P2 665 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 BBOF1Q8ND07 529 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 OR2T34Q8NGX1 318 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 ART4Q93070 314 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 EID2BQ96D98 161 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 GPR174Q9BXC1 333 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 C6orf106Q9H6K1 298 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-211ENST00000556536 PREBQ9HCU5 417 aa17.44■□□□□ 0.38
TUBB3-211ENST00000556536 ZFR2Q9UPR6 939 aaKnown RBP17.44■□□□□ 0.38
TUBB3-211ENST00000556536 C1orf232A0A0U1RR37 186 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 A0A1W2PQU0 124 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 GOLGA8CPA6NN73 597 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 C10orf142B7Z368 130 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 RNGTTO60942 597 aaKnown RBP17.43■□□□□ 0.38
TUBB3-211ENST00000556536 LMNAP02545 664 aaKnown RBP17.43■□□□□ 0.38
TUBB3-211ENST00000556536 SLC4A1P02730 911 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 C1SP09871 688 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 MLNP12872 115 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 NFKBIAP25963 317 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 MGAT1P26572 445 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 PLTPP55058 493 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 SARNPP82979 210 aaKnown RBP17.43■□□□□ 0.38
TUBB3-211ENST00000556536 PTSQ03393 145 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 POU6F1Q14863 301 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 FNBP1LQ5T0N5 605 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 LIPIQ6XZB0 460 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 DGLUCYQ7Z3D6 616 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 HSD11B1LQ7Z5J1 315 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 AGGF1Q8N302 714 aaeCLIP17.43■□□□□ 0.38
TUBB3-211ENST00000556536 CBARPQ8N350 705 aaPredicted RBP17.43■□□□□ 0.38
TUBB3-211ENST00000556536 DEFB119Q8N690 84 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 CXorf40AQ8TE69 158 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 SPACA7Q96KW9 195 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 KDM4CQ9H3R0 1056 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 XAB2Q9HCS7 855 aaKnown RBP17.43■□□□□ 0.38
TUBB3-211ENST00000556536 GDF3Q9NR23 364 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.43■□□□□ 0.38
TUBB3-211ENST00000556536 V9GYY5 206 aaPredicted RBP17.43■□□□□ 0.38
TUBB3-211ENST00000556536 CACNA1IQ9P0X4 2223 aa17.43■□□□□ 0.38
TUBB3-211ENST00000556536 IGLON5A6NGN9 336 aa17.42■□□□□ 0.38
TUBB3-211ENST00000556536 LRRC72A6NJI9 287 aa17.42■□□□□ 0.38
TUBB3-211ENST00000556536 SMAPO00193 183 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms