RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 AGAP3Q96P47 875 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 SMIM14Q96QK8 99 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 MCCC1Q96RQ3 725 aaPredicted RBP9.7□□□□□ -0.86
SRP54-210ENST00000556380 EDEM2Q9BV94 578 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 TDRD1Q9BXT4 1180 aaKnown RBP9.7□□□□□ -0.86
SRP54-210ENST00000556380 CEP41Q9BYV8 373 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 C10orf88Q9H8K7 445 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 GLOD4Q9HC38 313 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 GPR27Q9NS67 375 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 DNAAF2Q9NVR5 837 aaKnown RBP9.7□□□□□ -0.86
SRP54-210ENST00000556380 CA5BQ9Y2D0 317 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 R3HDM2Q9Y2K5 976 aaKnown RBP9.7□□□□□ -0.86
SRP54-210ENST00000556380 PCDHB9Q9Y5E1 797 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 SNX11Q9Y5W9 270 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 CEP295Q9C0D2 2601 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 SHROOM3Q8TF72 1996 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 POM121BA6NF01 834 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 TLR4O00206 839 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 NEMP1O14524 444 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 MTSS1O43312 755 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 SNRPBP14678 240 aaKnown RBP9.69□□□□□ -0.86
SRP54-210ENST00000556380 XPAP23025 273 aaPredicted RBP9.69□□□□□ -0.86
SRP54-210ENST00000556380 RBL1P28749 1068 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 AKT2P31751 481 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 CD86P42081 329 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 CLDN2P57739 230 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 NXPH1P58417 271 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 EIF3EP60228 445 aaKnown RBP9.69□□□□□ -0.86
SRP54-210ENST00000556380 RPL26P61254 145 aaKnown RBP9.69□□□□□ -0.86
SRP54-210ENST00000556380 OVGP1Q12889 678 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 SGCGQ13326 291 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 TEAD4Q15561 434 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 SLC14A2Q15849 920 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 CDKN3Q16667 212 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 ZNF423Q2M1K9 1284 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 HLA-BQ31612 363 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 ARMC12Q5T9G4 340 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 ERAP2Q6P179 960 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 LIPIQ6XZB0 460 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 DBX2Q6ZNG2 339 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 SPATS2Q86XZ4 545 aaKnown RBP9.69□□□□□ -0.86
SRP54-210ENST00000556380 SLC13A5Q86YT5 568 aaPredicted RBP9.69□□□□□ -0.86
SRP54-210ENST00000556380 ZNF567Q8N184 647 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 MINDY1Q8N5J2 469 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.69□□□□□ -0.86
SRP54-210ENST00000556380 SLC35B2Q8TB61 432 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 TRIB3Q96RU7 358 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 VAT1Q99536 393 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 FAM118BQ9BPY3 351 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 WRAP53Q9BUR4 548 aaKnown RBP9.69□□□□□ -0.86
SRP54-210ENST00000556380 CARD9Q9H257 536 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 IL21RQ9HBE5 538 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 FZD3Q9NPG1 666 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 TMEM9BQ9NQ34 198 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 HAUS2Q9NVX0 235 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 SEPT10Q9P0V9 454 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 B4GALT6Q9UBX8 382 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 TRHDEQ9UKU6 1024 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 RPL26L1Q9UNX3 145 aaKnown RBP9.69□□□□□ -0.86
SRP54-210ENST00000556380 CHKBQ9Y259 395 aa9.69□□□□□ -0.86
SRP54-210ENST00000556380 A0A0J9YYE9 177 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 NPIPB15A6NHN6 443 aaPredicted RBP9.68□□□□□ -0.86
SRP54-210ENST00000556380 H0Y8X5 98 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 H7C0C1 242 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 KCNK3O14649 394 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 ZSCAN12O43309 604 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 TM7SF2O76062 418 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 HEXIM1O94992 359 aaKnown RBP9.68□□□□□ -0.86
SRP54-210ENST00000556380 CPP00450 1065 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 TRBC1P01850 177 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 PTMAP06454 111 aaKnown RBP9.68□□□□□ -0.86
SRP54-210ENST00000556380 ZNF883P0CG24 379 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 RBP3P10745 1247 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 C6P13671 934 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 CD59P13987 128 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 SDHBP21912 280 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 LHCGRP22888 699 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 VIPR1P32241 457 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 HNF1BP35680 557 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 ATP5OP48047 213 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 RXRGP48443 463 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 FAM193AP78312 1265 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 STAT4Q14765 748 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 SHBQ15464 509 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 SIX1Q15475 284 aaPredicted RBP9.68□□□□□ -0.86
SRP54-210ENST00000556380 QPCTQ16769 361 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 WSCD2Q2TBF2 565 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 CFAP58Q5T655 872 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 CCDC181Q5TID7 509 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 CRTC1Q6UUV9 634 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 KDELC1Q6UW63 502 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 IL27RAQ6UWB1 636 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 KDM7AQ6ZMT4 941 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 PIP4P1Q86T03 277 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 KLHDC8BQ8IXV7 354 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 TP53I13Q8NBR0 393 aaPredicted RBP9.68□□□□□ -0.86
SRP54-210ENST00000556380 DENND6BQ8NEG7 585 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 SPATA22Q8NHS9 363 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 FAM174AQ8TBP5 190 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 CXorf40AQ8TE69 158 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms