RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 TIMP2P16035 220 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 CTPS1P17812 591 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 CD72P21854 359 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 TARSP26639 723 aaKnown RBP9.24□□□□□ -0.93
ACTN1-218ENST00000556343 HNF1BP35680 557 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 HMGCLP35914 325 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 RPS14P62263 151 aaKnown RBP9.24□□□□□ -0.93
ACTN1-218ENST00000556343 MTM1Q13496 603 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 NAB1Q13506 487 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 SLC29A2Q14542 456 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 IHHQ14623 411 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 CASP8Q14790 479 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 CST6Q15828 149 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 STEAP4Q687X5 459 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 LRIG3Q6UXM1 1119 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 CAPN12Q6ZSI9 719 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 SYT13Q7L8C5 426 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 SDCCAG8Q86SQ7 713 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-218ENST00000556343 PGBD3Q8N328 593 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 CXorf40AQ8TE69 158 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 EZH1Q92800 747 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-218ENST00000556343 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.24□□□□□ -0.93
ACTN1-218ENST00000556343 PBXIP1Q96AQ6 731 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 SIPA1Q96FS4 1042 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 MCCC1Q96RQ3 725 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-218ENST00000556343 CDH19Q9H159 772 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 TBC1D17Q9HA65 648 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 CHRAC1Q9NRG0 131 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 C20orf96Q9NUD7 363 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-218ENST00000556343 MUTYHQ9UIF7 546 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 APPL1Q9UKG1 709 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 SIT1Q9Y3P8 196 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 ZNF711Q9Y462 761 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 MYO10Q9HD67 2058 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 EXOC1LA0A1B0GW35 172 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 KRBA1A5PL33 1030 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 H0Y858 1186 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 PSMD11O00231 422 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 SLC7A4O43246 635 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 TSPAN6O43657 245 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 AP1G1O43747 822 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 ADAM23O75077 832 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 BANF1O75531 89 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 NUDT17P0C025 328 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 ADRB3P13945 408 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 SSTR1P30872 391 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 MSH2P43246 934 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 RPS9P46781 194 aaKnown RBP9.23□□□□□ -0.93
ACTN1-218ENST00000556343 CRADDP78560 199 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 SIGLEC14Q08ET2 396 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 MGAT5Q09328 741 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 CRYMQ14894 314 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 FASTKD3Q14CZ7 662 aaKnown RBP9.23□□□□□ -0.93
ACTN1-218ENST00000556343 CNGA3Q16281 694 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 CRY1Q16526 586 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 TMEM52BQ4KMG9 183 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 IER5LQ5T953 404 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 KIAA0930Q6ICG6 404 aaPredicted RBP9.23□□□□□ -0.93
ACTN1-218ENST00000556343 MRNIPQ6NTE8 343 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 UNC5AQ6ZN44 842 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 USP30Q70CQ3 517 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 DPPA4Q7L190 304 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 TAOK1Q7L7X3 1001 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 KCNMB4Q86W47 210 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 IGDCC3Q8IVU1 814 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 CTAGE3PQ8IX95 158 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 NRSN1Q8IZ57 195 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 CBARPQ8N350 705 aaPredicted RBP9.23□□□□□ -0.93
ACTN1-218ENST00000556343 MPP5Q8N3R9 675 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 HDDC3Q8N4P3 179 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 OTUD6BQ8N6M0 293 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 TSTD1Q8NFU3 115 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 OR6P1Q8NGX9 317 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 FBF1Q8TES7 1133 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 SCG3Q8WXD2 468 aaKnown RBP9.23□□□□□ -0.93
ACTN1-218ENST00000556343 ARRDC3Q96B67 414 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 NSMCE3Q96MG7 304 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 FAM167BQ9BTA0 163 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 FUT8Q9BYC5 575 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 STMN4Q9H169 189 aaPredicted RBP9.23□□□□□ -0.93
ACTN1-218ENST00000556343 PCDH12Q9NPG4 1184 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 ZDHHC4Q9NPG8 344 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 NLE1Q9NVX2 485 aaPredicted RBP9.23□□□□□ -0.93
ACTN1-218ENST00000556343 FBXL12Q9NXK8 326 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 BCCIPQ9P287 314 aaKnown RBP eCLIP9.23□□□□□ -0.93
ACTN1-218ENST00000556343 B4GALT6Q9UBX8 382 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 FETUBQ9UGM5 382 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 SLC24A2Q9UI40 661 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 SARDHQ9UL12 918 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 PLAAQ9Y263 795 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 VPS9D1Q9Y2B5 631 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 ARL5AQ9Y689 179 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 SLC30A1Q9Y6M5 507 aa9.23□□□□□ -0.93
ACTN1-218ENST00000556343 TCRBV21S2A2A0A5A6 115 aa9.22□□□□□ -0.93
ACTN1-218ENST00000556343 MID1O15344 667 aa9.22□□□□□ -0.93
ACTN1-218ENST00000556343 DCXO43602 365 aa9.22□□□□□ -0.93
ACTN1-218ENST00000556343 LDB2O43679 373 aa9.22□□□□□ -0.93
ACTN1-218ENST00000556343 LZTS3O60299 673 aaPredicted RBP9.22□□□□□ -0.93
ACTN1-218ENST00000556343 ZNF217O75362 1048 aa9.22□□□□□ -0.93
ACTN1-218ENST00000556343 TCEA3O75764 348 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms